Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 AL079303.1-201ENST00000486611 463 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL1P09341 RN7SL346P-201ENST00000491561 294 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 RN7SL350P-201ENST00000492591 299 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 RN7SL591P-201ENST00000496150 292 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC016559.2-201ENST00000510759 359 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.41□□□□□ -1.7
CXCL1P09341 MIR2117-201ENST00000516780 80 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.41□□□□□ -1.7
CXCL1P09341 OR7E158P-201ENST00000524483 910 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AP001994.1-201ENST00000527539 826 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC079064.1-201ENST00000528365 362 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC130364.2-201ENST00000528639 604 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL1P09341 AC124891.1-201ENST00000536322 519 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 RPL41P2-201ENST00000544920 409 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC137627.1-201ENST00000545761 289 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 OR4C49P-201ENST00000563891 900 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 PRPF19P1-201ENST00000584766 898 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 AP001823.1-201ENST00000604056 1003 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CXCL1P09341 AL445670.1-201ENST00000618889 801 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL1P09341 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL1P09341 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL1P09341 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.4□□□□□ -1.7
CXCL1P09341 AL353796.1-201ENST00000561542 3241 ntBASIC4.4□□□□□ -1.7
CXCL1P09341 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CXCL1P09341 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CXCL1P09341 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.4□□□□□ -1.7
CXCL1P09341 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CXCL1P09341 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CXCL1P09341 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.4□□□□□ -1.71
CXCL1P09341 RN7SKP144-201ENST00000411108 279 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 VN1R21P-201ENST00000426703 765 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 GTF3AP6-201ENST00000432585 986 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 OR2L9P-201ENST00000444456 913 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 RBMY2EP-202ENST00000456360 940 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 AC004129.2-201ENST00000457229 287 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 MAST4-IT1-201ENST00000514241 658 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 RNA5SP434-201ENST00000516647 121 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.4□□□□□ -1.71
CXCL1P09341 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.4□□□□□ -1.71
CXCL1P09341 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.4□□□□□ -1.71
CXCL1P09341 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.4□□□□□ -1.71
CXCL1P09341 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.4□□□□□ -1.71
CXCL1P09341 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.4□□□□□ -1.71
CXCL1P09341 AL390334.1-201ENST00000556395 450 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.4□□□□□ -1.71
CXCL1P09341 NIFKP4-201ENST00000567275 1192 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 MTCYBP13-201ENST00000578634 1093 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 AL031429.2-201ENST00000602605 649 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 AC103564.3-201ENST00000621194 220 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 AC018558.4-201ENST00000622153 281 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 AC117503.3-201ENST00000623811 601 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 AC112198.2-201ENST00000426589 6996 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CXCL1P09341 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CXCL1P09341 FBXL21-201ENST00000297158 1305 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.4□□□□□ -1.71
CXCL1P09341 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 STX3-208ENST00000641815 3236 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CXCL1P09341 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
CXCL1P09341 TRIM51GP-201ENST00000534741 1350 ntBASIC4.4□□□□□ -1.71
CXCL1P09341 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 AL031595.2-201ENST00000624215 19071 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms