Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.9□□□□□ -1.63
CD74P04233 OR9G2P-201ENST00000533326 880 ntBASIC4.9□□□□□ -1.63
CD74P04233 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.9□□□□□ -1.63
CD74P04233 AC137627.1-201ENST00000545761 289 ntBASIC4.9□□□□□ -1.63
CD74P04233 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.9□□□□□ -1.63
CD74P04233 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.9□□□□□ -1.63
CD74P04233 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.9□□□□□ -1.63
CD74P04233 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.9□□□□□ -1.63
CD74P04233 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.9□□□□□ -1.63
CD74P04233 AL645933.2-201ENST00000606743 1207 ntBASIC4.9□□□□□ -1.63
CD74P04233 RNU6-84P-201ENST00000607737 102 ntBASIC4.9□□□□□ -1.63
CD74P04233 AL139124.1-201ENST00000609123 421 ntBASIC4.9□□□□□ -1.63
CD74P04233 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.9□□□□□ -1.63
CD74P04233 AC132825.8-201ENST00000640783 297 ntBASIC4.9□□□□□ -1.63
CD74P04233 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.9□□□□□ -1.63
CD74P04233 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CD74P04233 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CD74P04233 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.9□□□□□ -1.63
CD74P04233 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
CD74P04233 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.9□□□□□ -1.63
CD74P04233 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD74P04233 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.9□□□□□ -1.63
CD74P04233 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.89□□□□□ -1.63
CD74P04233 HSPD1P7-201ENST00000447985 1686 ntBASIC4.89□□□□□ -1.63
CD74P04233 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.89□□□□□ -1.63
CD74P04233 AL603750.1-201ENST00000624216 1717 ntBASIC4.89□□□□□ -1.63
CD74P04233 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 AC018717.1-201ENST00000457712 1505 ntBASIC4.89□□□□□ -1.63
CD74P04233 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CD74P04233 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.89□□□□□ -1.63
CD74P04233 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 Z82198.3-201ENST00000421145 199 ntBASIC4.89□□□□□ -1.63
CD74P04233 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.89□□□□□ -1.63
CD74P04233 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 HMGN1P32-201ENST00000441744 256 ntBASIC4.89□□□□□ -1.63
CD74P04233 WDR82P2-201ENST00000444540 928 ntBASIC4.89□□□□□ -1.63
CD74P04233 UBE2V2P4-201ENST00000447495 259 ntBASIC4.89□□□□□ -1.63
CD74P04233 NPM1P19-201ENST00000450070 712 ntBASIC4.89□□□□□ -1.63
CD74P04233 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 RPS7P11-201ENST00000484240 586 ntBASIC4.89□□□□□ -1.63
CD74P04233 RN7SL655P-201ENST00000486087 298 ntBASIC4.89□□□□□ -1.63
CD74P04233 SNRPCP11-201ENST00000492453 205 ntBASIC4.89□□□□□ -1.63
CD74P04233 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.89□□□□□ -1.63
CD74P04233 AC110056.1-201ENST00000525759 911 ntBASIC4.89□□□□□ -1.63
CD74P04233 AC135983.3-201ENST00000528049 1226 ntBASIC4.89□□□□□ -1.63
CD74P04233 CHEK2P2-201ENST00000554701 672 ntBASIC4.89□□□□□ -1.63
CD74P04233 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.89□□□□□ -1.63
CD74P04233 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 AC006363.1-201ENST00000603806 463 ntBASIC4.89□□□□□ -1.63
CD74P04233 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 AL008582.1-201ENST00000609612 442 ntBASIC4.89□□□□□ -1.63
CD74P04233 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.89□□□□□ -1.63
CD74P04233 MIR6813-201ENST00000621638 56 ntBASIC4.89□□□□□ -1.63
CD74P04233 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD74P04233 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.89□□□□□ -1.63
CD74P04233 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.89□□□□□ -1.63
CD74P04233 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.89□□□□□ -1.63
CD74P04233 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CD74P04233 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CD74P04233 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CD74P04233 RNA5SP155-201ENST00000411154 129 ntBASIC4.88□□□□□ -1.63
CD74P04233 HYALP1-201ENST00000417674 1279 ntBASIC4.88□□□□□ -1.63
CD74P04233 RPS4XP5-201ENST00000419038 768 ntBASIC4.88□□□□□ -1.63
CD74P04233 FAM183DP-201ENST00000421987 399 ntBASIC4.88□□□□□ -1.63
CD74P04233 AL445928.1-201ENST00000435545 222 ntBASIC4.88□□□□□ -1.63
CD74P04233 AC064862.5-201ENST00000440618 334 ntBASIC4.88□□□□□ -1.63
CD74P04233 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.88□□□□□ -1.63
CD74P04233 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 NPM1P9-201ENST00000453156 844 ntBASIC4.88□□□□□ -1.63
CD74P04233 MEMO1P4-201ENST00000453590 386 ntBASIC4.88□□□□□ -1.63
CD74P04233 SEPT7P3-201ENST00000455017 621 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 356.1 ms