Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CKS1BP1-201ENST00000555221 240 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 NPM1P5-201ENST00000557228 838 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 AC005726.4-201ENST00000582858 458 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.46□□□□□ -1.54
ZIC3O60481 AC005776.1-201ENST00000603164 290 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AC242628.1-201ENST00000606810 391 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 OR51C1P-201ENST00000608504 942 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AC110792.4-201ENST00000609843 298 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 MIR6778-201ENST00000617912 73 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ZIC3O60481 AP003499.2-201ENST00000624100 483 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ZIC3O60481 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 AC006600.2-201ENST00000624834 2506 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 MIR365B-201ENST00000362317 111 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 RNA5SP273-201ENST00000362484 113 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 RNA5SP477-201ENST00000362639 119 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 SNORD51.1-201ENST00000365405 77 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 RNU6-40P-201ENST00000384254 107 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 PTGES3P2-201ENST00000407942 482 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC066692.1-201ENST00000421721 457 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AC245884.2-201ENST00000426257 404 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 VN1R110P-201ENST00000438988 971 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 RPL31P20-201ENST00000449593 360 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC104849.1-201ENST00000462623 405 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AC022336.1-201ENST00000475510 337 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 RPL5P12-201ENST00000477071 851 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 RN7SL193P-201ENST00000491708 276 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC008945.1-201ENST00000505144 499 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 OR5H7P-201ENST00000514084 930 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AP003102.1-201ENST00000525638 661 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 NANOGNBP2-201ENST00000544753 553 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC007494.1-201ENST00000562293 760 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AC018558.5-201ENST00000565840 952 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC067773.1-201ENST00000603284 1094 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 AC022919.1-201ENST00000624979 626 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.45□□□□□ -1.54
ZIC3O60481 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZIC3O60481 AF287957.1-201ENST00000607368 1595 ntBASIC5.45□□□□□ -1.54
ZIC3O60481 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
ZIC3O60481 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.45□□□□□ -1.54
ZIC3O60481 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms