Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 THEM7P-201ENST00000419556 672 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AC093166.4-201ENST00000457867 318 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 RPS23P2-201ENST00000463671 415 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AC099521.1-201ENST00000482557 334 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 RPS27P20-201ENST00000492051 246 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AC004801.6-201ENST00000616571 978 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AL022311.1-201ENST00000623726 19416 ntBASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC068870.1-201ENST00000563737 2455 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 U3.28-201ENST00000391249 210 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 NPM1P37-201ENST00000403105 874 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 RN7SKP29-201ENST00000410957 272 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 Z82198.3-201ENST00000421145 199 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC009784.1-201ENST00000426484 460 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 RPSAP32-201ENST00000432681 526 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 TMEM183AP1-205ENST00000432739 290 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 GAPDHP59-201ENST00000435908 267 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 YRDCP3-201ENST00000456507 480 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 RN7SL254P-201ENST00000460609 284 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC092349.1-201ENST00000504903 310 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 OR51A1P-201ENST00000511110 946 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC139365.2-201ENST00000517972 253 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 OR4A17P-201ENST00000526032 904 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC092332.1-201ENST00000563684 829 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 MIR6809-201ENST00000612189 116 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC005899.7-201ENST00000618199 588 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC021766.1-201ENST00000624404 741 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 GVINP1-202ENST00000531871 7271 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 OR4F13P-202ENST00000560066 2054 ntBASIC5.7□□□□□ -1.5
TRIM49D1C9J1S8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AL354854.1-201ENST00000455940 1363 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 GPS2P1-201ENST00000411761 986 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AL357752.1-201ENST00000412817 349 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AL354890.1-201ENST00000413730 346 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 EIF5AP4-201ENST00000441206 465 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AC005077.1-201ENST00000449226 375 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms