Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 OR4A42P-201ENST00000531397 938 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 ZNF322P1-201ENST00000568013 1209 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 MIR4502-201ENST00000580432 81 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 MIR4660-201ENST00000583549 74 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC060780.2-201ENST00000589047 198 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 MIR6889-201ENST00000613185 59 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 MIR6806-201ENST00000622141 64 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC012078.1-201ENST00000405035 1646 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC119674.1-202ENST00000641333 1860 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 RN7SKP171-201ENST00000364417 303 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 RNA5SP211-201ENST00000365516 117 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL121878.1-201ENST00000418638 859 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL354893.1-201ENST00000433735 348 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL353662.1-201ENST00000439099 327 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 EEF1B2P3-201ENST00000447718 678 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC118758.1-202ENST00000454719 225 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 ACA64.4-201ENST00000459070 127 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 RPL12P24-201ENST00000474907 486 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 TRBV5-2-201ENST00000489095 273 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC111000.6-201ENST00000514471 709 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 snoU109.5-201ENST00000516231 132 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC110056.1-201ENST00000525759 911 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC002310.3-201ENST00000569728 723 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 OR1E3-201ENST00000575608 948 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC004801.6-201ENST00000616571 978 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL591926.1-201ENST00000620542 217 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AL357562.1-201ENST00000624911 609 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC073488.3-201ENST00000631611 778 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC002525.1-201ENST00000624392 1622 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC012254.3-201ENST00000591183 2117 ntBASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DRB4X5D2U9 AC026523.2-201ENST00000625039 7739 ntBASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 AC008627.1-201ENST00000517511 1704 ntBASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DRB4X5D2U9 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms