Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-252P-201ENST00000363232 107 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 RN7SKP281-201ENST00000410472 352 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 UBE2V1P11-201ENST00000411559 285 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 OSTCP4-201ENST00000424397 449 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC099782.1-201ENST00000425889 474 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC008379.1-201ENST00000463655 464 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 FTH1P8-201ENST00000498161 514 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC112484.3-201ENST00000505910 329 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC106800.3-201ENST00000511389 308 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC073916.1-201ENST00000545095 130 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC008055.1-201ENST00000547032 609 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC073046.2-201ENST00000604756 527 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC026741.1-201ENST00000605892 482 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AL033543.1-201ENST00000623440 13454 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AL353743.3-201ENST00000442109 1468 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 NEPNP-201ENST00000404786 1371 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RNA5SP279-201ENST00000365513 117 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RNU4-31P-201ENST00000384211 141 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 DHFRP2-201ENST00000414224 547 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 OR6K4P-201ENST00000423179 955 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC010240.2-201ENST00000445363 1205 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 SNX18P26-201ENST00000458433 740 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RPL5P12-201ENST00000477071 851 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RPL34P33-201ENST00000486062 334 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC073610.1-201ENST00000489971 396 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RN7SL362P-201ENST00000494228 267 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC122718.2-201ENST00000505325 591 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 MTCO3P27-201ENST00000514397 196 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RNU5A-7P-201ENST00000515979 116 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AP003355.1-201ENST00000518956 587 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AL078601.3-201ENST00000573303 535 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 EIF1P5-201ENST00000585002 234 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 CASC19-246ENST00000641625 1606 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms