Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC012414.2-201ENST00000559474 187 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 OR7A11P-201ENST00000597719 953 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC020765.1-201ENST00000604296 328 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AF129408.1-201ENST00000608767 431 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC022106.1-201ENST00000612834 766 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AL138955.1-201ENST00000622881 1040 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AL445984.1-201ENST00000637834 659 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 CASC19-238ENST00000641523 1558 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AP002370.1-201ENST00000528055 1602 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC079753.1-201ENST00000623243 3868 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 DOCK11P1-201ENST00000553480 5932 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AL354854.1-201ENST00000455940 1363 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 RPS7P14-201ENST00000426405 583 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 RANP2-201ENST00000456833 229 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC093827.1-201ENST00000480094 861 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AL158068.1-201ENST00000506116 616 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC016550.3-201ENST00000515706 767 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC084337.1-201ENST00000524809 686 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AL671309.1-201ENST00000603750 544 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC006924.1-201ENST00000610750 559 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC245014.3-201ENST00000618589 347 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 AC008691.1-209ENST00000642094 814 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 CYP2G2P-201ENST00000594920 1485 ntBASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTDP1Q9Y5B0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CTDP1Q9Y5B0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CTDP1Q9Y5B0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CTDP1Q9Y5B0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.21□□□□□ -1.25
CTDP1Q9Y5B0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CTDP1Q9Y5B0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 RNU1-49P-201ENST00000363468 159 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 RNA5SP514-201ENST00000363717 111 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 MIR130B-202ENST00000385018 82 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC023141.3-201ENST00000436698 278 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms