Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008496.1-201ENST00000509131 295 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 MTCO1P30-201ENST00000515244 580 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 BMPR1APS2-201ENST00000527904 1012 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 FAM92A1P1-201ENST00000528023 890 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 ELOCP32-201ENST00000548625 324 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 CRADD-210ENST00000552033 622 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 Z82195.1-201ENST00000604558 398 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AL159169.3-201ENST00000608871 561 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AL442067.1-201ENST00000613261 223 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 HOTTIP_2.1-201ENST00000616633 376 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC008121.3-201ENST00000618726 433 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC211433.3-201ENST00000623770 375 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC005753.1-201ENST00000623837 618 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 OR7E161P-202ENST00000641994 1033 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 MIPEPP2-201ENST00000422560 1819 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 EEF1A1P33-201ENST00000554413 1362 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC092111.2-201ENST00000611627 1414 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 RNU5B-4P-201ENST00000363508 111 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 MIR191-201ENST00000384873 92 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 MIR621-201ENST00000384919 96 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 RPL5P20-201ENST00000403848 896 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC244452.1-201ENST00000413798 141 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 USP9YP18-201ENST00000425912 695 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 FO393414.1-201ENST00000428697 1184 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 MRPS33P4-201ENST00000434892 317 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 USP9YP15-201ENST00000442391 422 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC002486.2-201ENST00000447806 590 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 ST13P21-201ENST00000453250 1098 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC117395.2-201ENST00000463122 1128 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 ST13P14-201ENST00000474095 734 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 RN7SL518P-201ENST00000491887 280 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 RNA5SP518-201ENST00000515957 119 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 IGLV1-62-201ENST00000518003 441 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC090971.3-201ENST00000557871 1041 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AL031846.1-201ENST00000560933 314 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 RN7SL66P-201ENST00000582099 264 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 VN1R82P-201ENST00000601481 356 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 BNIP3P9-201ENST00000603714 553 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC128687.1-201ENST00000605304 619 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AL645933.2-201ENST00000606743 1207 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AL442067.2-201ENST00000614033 363 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC078909.2-201ENST00000620584 398 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC092111.1-201ENST00000618256 3358 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC018765.1-201ENST00000623357 3446 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 RMST-210ENST00000640149 2844 ntTSL 5 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms