Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AC006335.2-201ENST00000437993 330 ntBASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AC064862.4-201ENST00000442180 334 ntBASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 RPS26P39-201ENST00000469206 341 ntBASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 IGLV3-24-201ENST00000517477 197 ntBASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 CCAT2-201ENST00000630920 1752 ntBASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 LINC02019-201ENST00000608605 2060 ntBASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 KYNUP3-201ENST00000574386 1341 ntBASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPC1L1Q9UHC9 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AL662874.1-201ENST00000426065 230 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 BX119321.1-201ENST00000428912 797 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 LDHAP2-201ENST00000437325 985 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AC002504.1-201ENST00000438281 691 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AC005297.1-201ENST00000444765 862 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 DHFRP1-201ENST00000579682 559 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 MIR6826-201ENST00000617808 98 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 MRE11P1-201ENST00000464884 2127 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 ZNF969P-201ENST00000510345 2341 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 AL355488.2-201ENST00000609909 2850 ntBASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.72□□□□□ -1.17
NPC1L1Q9UHC9 U3.10-201ENST00000364459 214 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 RN7SKP293-201ENST00000411389 296 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 Z84478.1-201ENST00000438230 1219 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 DNAJC19P5-201ENST00000443295 316 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 RN7SL717P-201ENST00000478343 297 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 DUTP7-201ENST00000507982 486 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 RPL7L1P4-201ENST00000513004 707 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 AC021146.10-201ENST00000515628 706 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 TMEM97P2-201ENST00000517841 403 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 AL049840.6-201ENST00000604583 345 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 AC090607.5-201ENST00000615692 224 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 AP004607.3-201ENST00000530354 3915 ntBASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NPC1L1Q9UHC9 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 CR788268.1-201ENST00000603931 1809 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 GAPDHP24-201ENST00000328713 983 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 U3.25-201ENST00000391209 220 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms