Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC140479.2-201ENST00000421567 3130 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 RNU11-201ENST00000387069 134 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL354890.1-201ENST00000413730 346 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC007679.3-201ENST00000434035 414 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AMYP1-201ENST00000440059 1023 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC068491.1-201ENST00000449539 1241 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 CST12P-201ENST00000457644 362 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC021146.10-201ENST00000515628 706 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 OR8Q1P-201ENST00000526467 655 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC006512.2-201ENST00000543250 486 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 CYCSP38-201ENST00000559840 322 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL360012.1-201ENST00000602813 131 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC048341.3-201ENST00000619323 491 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AL355834.1-201ENST00000556602 3965 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 AC114774.1-201ENST00000507410 1770 ntBASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VPS29Q9UBQ0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AL354868.1-201ENST00000417077 482 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC126120.1-201ENST00000431082 470 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC093166.4-201ENST00000457867 318 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 RPS23P2-201ENST00000463671 415 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 RPS7P6-201ENST00000485777 579 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 RN7SL284P-201ENST00000498823 275 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC111000.6-201ENST00000514471 709 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 GAPDHP62-201ENST00000515313 990 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 OR5D2P-201ENST00000524390 911 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC079905.1-201ENST00000549280 475 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 MIR6889-201ENST00000613185 59 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC015712.7-201ENST00000615211 635 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AC244100.4-201ENST00000617747 388 ntBASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS29Q9UBQ0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC009962.1-201ENST00000567327 3813 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 AC018628.1-201ENST00000624147 3819 ntBASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS29Q9UBQ0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms