Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PCNAP4-201ENST00000532690 730 ntBASIC5.56□□□□□ -1.52
CCDC88CQ9P219 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AL021918.2-201ENST00000613415 194 ntBASIC5.56□□□□□ -1.52
CCDC88CQ9P219 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 CCAT2-201ENST00000630920 1752 ntBASIC5.56□□□□□ -1.52
CCDC88CQ9P219 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 CASC19-260ENST00000641828 2001 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 OR9K1P-201ENST00000326513 941 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RNU6-171P-201ENST00000384354 107 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 OR7E101P-201ENST00000400428 513 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RN7SKP293-201ENST00000411389 296 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 HMGB3P24-201ENST00000433260 622 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 KRT8P51-201ENST00000438938 274 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RPL5P12-201ENST00000477071 851 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RN7SL57P-201ENST00000493687 290 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 PSMA2P2-201ENST00000504319 686 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RNU6-615P-201ENST00000516065 106 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AL163952.1-202ENST00000569625 600 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AC119403.2-201ENST00000590960 598 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RNA5SP440-201ENST00000612665 119 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RN7SL787P-201ENST00000613000 284 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RPS2P45-201ENST00000469997 2057 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AC015689.2-201ENST00000528172 1738 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 RPS15AP30-201ENST00000420976 390 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 FMO7P-201ENST00000436045 768 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 PPIAP19-201ENST00000486414 492 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 AC106872.4-201ENST00000510050 523 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 MIR4420-201ENST00000583944 77 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 MFSD8-219ENST00000641228 2559 ntBASIC5.55□□□□□ -1.52
CCDC88CQ9P219 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC88CQ9P219 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AC007842.1-201ENST00000597336 2039 ntBASIC5.54□□□□□ -1.52
CCDC88CQ9P219 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 RN7SL273P-201ENST00000481561 299 ntBASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms