Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OR4A6P-201ENST00000534364 970 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AC090888.2-201ENST00000559765 1144 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 CTSLP2-201ENST00000580501 394 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 MIR4310-201ENST00000582950 57 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AL049840.5-201ENST00000602827 552 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AC079395.3-201ENST00000615161 484 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AP005212.3-201ENST00000619964 528 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AC104985.3-201ENST00000623479 597 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 MTND2P41-201ENST00000637599 773 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 AC010329.1-201ENST00000593903 8328 ntBASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCM2LQ9NUG4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
CCM2LQ9NUG4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC099786.3-201ENST00000565735 1410 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC007159.1-201ENST00000566529 4706 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 IMMTP1-201ENST00000435590 2219 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 ZNF849P-201ENST00000594711 1566 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 FAUP2-201ENST00000394301 401 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LDHAP5-201ENST00000394996 622 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 VN1R12P-201ENST00000403778 876 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 MTCO2P21-201ENST00000419780 677 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC005005.2-201ENST00000420779 380 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 CHCHD3P1-201ENST00000425516 676 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 ETF1P3-201ENST00000430422 1160 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 MTCO2P20-201ENST00000437339 673 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 MTCYBP31-201ENST00000438855 1122 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 OR2L9P-201ENST00000444456 913 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL845321.1-201ENST00000444603 348 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 Z73417.1-201ENST00000447373 778 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 CALM1P2-201ENST00000452941 448 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 OR7E7P-201ENST00000455678 1012 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 RN7SL379P-201ENST00000479912 293 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC093719.1-201ENST00000480427 441 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 RPL34P33-201ENST00000486062 334 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 NACAP6-201ENST00000509572 622 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC005351.1-201ENST00000511152 786 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC023310.2-201ENST00000553844 547 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 RN7SL622P-201ENST00000585292 275 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC113368.1-201ENST00000603736 382 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC018618.2-201ENST00000604770 446 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL035410.2-201ENST00000604963 864 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AC097478.2-201ENST00000610572 514 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms