Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 GAPDHP69-201ENST00000425504 1008 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC007365.2-201ENST00000428806 458 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 BX119904.1-201ENST00000432026 348 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AL606490.7-201ENST00000433136 191 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 ISCA1P2-201ENST00000438679 421 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 RPL12P26-201ENST00000452430 487 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 BZW1P1-201ENST00000454901 1240 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 MTCO2P18-201ENST00000457151 658 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 TREML3P-201ENST00000457327 501 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 RPS16P9-201ENST00000477220 427 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 RPS27AP16-201ENST00000492222 470 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 TECRP2-201ENST00000503270 928 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC105420.1-201ENST00000504389 582 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC112184.1-201ENST00000505179 312 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC006518.2-201ENST00000542513 940 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AL135978.1-201ENST00000553618 1266 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC093524.1-201ENST00000564266 1094 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC095057.3-201ENST00000567102 1157 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC007346.1-201ENST00000569208 867 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 RN7SL42P-201ENST00000579786 294 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AL590229.1-201ENST00000603497 542 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC239868.4-201ENST00000608318 671 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC013468.1-201ENST00000608680 598 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AP000254.1-201ENST00000609934 520 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 Z69908.1-201ENST00000622603 247 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC007490.1-201ENST00000624321 703 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC091965.5-201ENST00000624785 342 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 AC069542.2-201ENST00000624816 216 ntBASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.11□□□□□ -1.43
SEC61A2Q9H9S3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC027514.1-201ENST00000588561 1603 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC119674.1-204ENST00000641348 1343 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RNA5SP65-201ENST00000363166 119 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RNU6-697P-201ENST00000363348 107 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RNU4-92P-201ENST00000363783 136 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MIR541-201ENST00000401360 84 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AL132875.1-201ENST00000403623 949 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 NUDT19P3-201ENST00000404698 555 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms