Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.52□□□□□ -1.36
CCSER1Q9C0I3 SAMMSON-210ENST00000641260 1308 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 RPL11P3-201ENST00000395256 523 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AC079807.1-201ENST00000429993 481 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AC017007.3-201ENST00000479865 435 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AC090058.1-201ENST00000498788 435 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 Y_RNA.667-201ENST00000516212 107 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AC060775.1-201ENST00000518241 520 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AP004609.2-201ENST00000532177 190 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AC009962.1-201ENST00000567327 3813 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AL138895.2-201ENST00000603019 178 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AP004607.3-201ENST00000530354 3915 ntBASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCSER1Q9C0I3 AC232271.1-201ENST00000602455 2715 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 OR2W4P-201ENST00000406496 926 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 RPS17P15-201ENST00000475609 349 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC096996.1-201ENST00000563813 325 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC067773.1-201ENST00000603284 1094 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 HIRAP1-201ENST00000605318 787 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 FO681491.1-202ENST00000623392 737 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 AC092070.2-203ENST00000598377 3644 ntBASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCSER1Q9C0I3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 MSL3P1-202ENST00000440028 1468 ntBASIC6.5□□□□□ -1.37
CCSER1Q9C0I3 SUGT1P2-201ENST00000379452 992 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms