Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 SEC63P2-201ENST00000503863 1939 ntBASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.95□□□□□ -1.3
TRIM55Q9BYV6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 TPTE2P2-201ENST00000403471 1466 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC005618.1-201ENST00000606901 3148 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 RNU6-543P-201ENST00000362576 108 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 RNU1-87P-201ENST00000363727 170 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 FCF1P5-201ENST00000406490 482 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 RNA5SP498-201ENST00000411342 120 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 RPSAP60-201ENST00000415403 880 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 RPS7P12-201ENST00000422385 582 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC097721.1-201ENST00000427150 1253 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 YWHAEP5-201ENST00000431545 765 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 DBIL5P2-201ENST00000443827 253 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 CDC42P1-201ENST00000456658 548 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 RPL23AP44-201ENST00000482216 473 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC069528.1-202ENST00000482888 637 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 RN7SL612P-201ENST00000497704 295 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 HPRT1P2-201ENST00000505250 544 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC034244.1-201ENST00000507687 207 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC107952.1-201ENST00000524200 376 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AP000662.1-201ENST00000530952 487 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 DUXAP6-201ENST00000553858 601 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC113361.1-201ENST00000606683 543 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC016877.3-201ENST00000606778 504 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AL451064.1-201ENST00000607718 471 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC084782.3-201ENST00000612282 578 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 MIR6813-201ENST00000621638 56 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AL138693.1-201ENST00000622219 129 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AP001153.1-201ENST00000641024 338 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC013488.1-201ENST00000526618 1838 ntBASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM55Q9BYV6 AC022034.1-201ENST00000512867 2156 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 CCT8P1-201ENST00000413611 1657 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL139384.2-201ENST00000613809 3590 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms