Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 RPSAP66-201ENST00000592196 606 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL390838.2-201ENST00000602394 274 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL157899.1-201ENST00000604110 936 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL591222.2-201ENST00000604443 754 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 RPL12P48-201ENST00000605620 304 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC012629.3-201ENST00000623397 328 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL356585.10-201ENST00000641883 123 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 NF1P8-201ENST00000415351 1461 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 HSPA8P11-201ENST00000508840 1898 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 NBPF8-201ENST00000583271 5330 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC120338.1-201ENST00000625074 1541 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AL049737.1-201ENST00000413920 1403 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 BMS1P3-201ENST00000372011 932 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 OR51A3P-201ENST00000413596 924 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC011233.1-201ENST00000422812 283 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 MTCO3P21-201ENST00000430791 643 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC104698.1-201ENST00000435671 276 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 UBE2D3P4-201ENST00000441973 436 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 YWHAQP9-201ENST00000445891 512 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 HMGB1P4-201ENST00000455362 567 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 RPLP0P1-201ENST00000457002 361 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 RPL7AP52-201ENST00000458096 790 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 RNU7-125P-201ENST00000458760 62 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 RPSAP48-201ENST00000466509 889 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 GLRXP3-201ENST00000470810 321 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC091982.1-202ENST00000473923 343 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC114940.1-201ENST00000512162 1265 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 SCARNA18.2-201ENST00000516882 84 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 HIGD1AP17-201ENST00000554576 276 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 RN7SL667P-201ENST00000582817 298 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC110760.3-201ENST00000598794 467 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC011453.2-201ENST00000603737 729 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC106791.2-201ENST00000604680 391 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 U91328.4-201ENST00000608919 517 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AL031777.2-201ENST00000611953 196 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC005899.6-201ENST00000620729 297 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 AC068620.4-201ENST00000636730 1182 ntBASIC7.9□□□□□ -1.14
TRAIPQ9BWF2 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
TRAIPQ9BWF2 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms