Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
IFT140Q96RY7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 AC015977.1-201ENST00000418887 292 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 TPT1P12-201ENST00000448968 492 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 RPL37AP8-201ENST00000494116 276 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 MIR2117-201ENST00000516780 80 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 IGLV3-24-201ENST00000517477 197 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 AC024940.3-201ENST00000538551 316 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 CASC19-205ENST00000641013 1411 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
IFT140Q96RY7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 CHMP1B2P-201ENST00000399581 597 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 RN7SL165P-201ENST00000477476 291 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 RN7SKP288-201ENST00000516227 268 ntBASIC9.34□□□□□ -0.91
IFT140Q96RY7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
IFT140Q96RY7 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 RNA5SP123-201ENST00000363244 119 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 MIR551A-201ENST00000385042 96 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 AC093655.2-201ENST00000425735 631 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 AC016712.1-201ENST00000431088 378 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
IFT140Q96RY7 RN7SL205P-201ENST00000490174 284 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 KCTD9P4-201ENST00000526766 1166 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 RN7SL52P-201ENST00000584271 284 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 AC004890.3-201ENST00000605566 1095 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 AC083809.1-201ENST00000615051 472 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 RN7SL722P-201ENST00000617780 284 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 RN7SL565P-201ENST00000618246 284 ntBASIC9.33□□□□□ -0.92
IFT140Q96RY7 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC9.33□□□□□ -0.92
IFT140Q96RY7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 OLMALINC-203ENST00000641087 3779 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 NLRP3P1-201ENST00000622303 1785 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 PPP2R2DP1-201ENST00000420526 637 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 RPL7P56-201ENST00000429441 717 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 AL022319.1-201ENST00000458183 1167 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 AC004980.4-201ENST00000513375 203 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 SNORD91A-202ENST00000609620 191 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 AC112694.2-201ENST00000623697 768 ntBASIC9.32□□□□□ -0.92
IFT140Q96RY7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms