Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC093155.2-201ENST00000420734 937 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AC127526.2-201ENST00000426436 775 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 OSTCP1-201ENST00000455507 450 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 MIR3614-201ENST00000581261 86 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AC015689.2-201ENST00000528172 1738 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 XKRY2-202ENST00000623874 1581 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 XKRY-202ENST00000624960 1581 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 RN7SKP78-201ENST00000364711 318 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 RN7SKP186-201ENST00000365371 303 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 SNORA70.9-201ENST00000384370 135 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AL357752.1-201ENST00000412817 349 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 RPL23AP18-201ENST00000416139 468 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC019205.1-201ENST00000421830 730 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AL389925.1-201ENST00000432257 728 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC073410.1-201ENST00000435125 589 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 RPS3AP38-201ENST00000435889 763 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 GAPDHP48-201ENST00000436626 961 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC006539.1-201ENST00000481419 501 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 DPPA2P4-201ENST00000563717 878 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AL163952.1-202ENST00000569625 600 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 MIR4260-201ENST00000583107 67 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 RN7SL544P-201ENST00000617232 284 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 RN7SL763P-201ENST00000620922 284 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 IMMTP1-201ENST00000435590 2219 ntBASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ECHDC3Q96DC8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ECHDC3Q96DC8 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 MAPK10-261ENST00000641050 3109 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 RNA5SP510-201ENST00000364697 99 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AL031985.1-201ENST00000392713 418 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 RPS26P38-201ENST00000414476 348 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC104843.2-201ENST00000427666 297 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 USP24P1-201ENST00000433802 779 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC009120.1-201ENST00000493458 473 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 snoU109.5-201ENST00000516231 132 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC139365.2-201ENST00000517972 253 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC078899.1-201ENST00000521432 1185 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC126615.2-201ENST00000553003 515 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms