Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 ZNF37CP-201ENST00000406795 241 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 CDY17P-201ENST00000414121 1282 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 DHFRP2-201ENST00000414224 547 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC002127.1-201ENST00000421305 225 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 RPS7P14-201ENST00000426405 583 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 CDY8P-201ENST00000428380 1279 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC138761.5-201ENST00000433967 325 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 MTND2P40-201ENST00000436718 841 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC234771.4-201ENST00000441416 730 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 CDY20P-201ENST00000447528 1279 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AL034369.1-201ENST00000453808 477 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 RN7SL83P-201ENST00000468131 297 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC093827.1-201ENST00000480094 861 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 SNORA48.9-201ENST00000516419 162 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 Y_RNA.710-201ENST00000516975 110 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 IGHV4-55-201ENST00000520889 368 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 NPM1P45-201ENST00000583151 559 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC006272.2-201ENST00000594725 163 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC020915.5-201ENST00000596836 964 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC068726.1-201ENST00000610993 341 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 MIR6070-201ENST00000613967 103 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AL137067.2-201ENST00000621202 131 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC007204.1-201ENST00000621794 555 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 MTCO1P28-201ENST00000574177 1528 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC119674.1-202ENST00000641333 1860 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 DHFRP5-201ENST00000406944 564 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 GPN3P1-201ENST00000423883 535 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 OSTCP4-201ENST00000424397 449 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 EMC3-AS1-205ENST00000438698 534 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 MORF4-201ENST00000447135 971 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 PPIAP32-201ENST00000449940 472 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 RN7SL643P-201ENST00000471845 291 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC124945.1-201ENST00000485133 188 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC117525.1-201ENST00000515228 503 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 RNA5SP206-201ENST00000516703 121 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 TPM3P3-201ENST00000521343 354 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC084851.2-201ENST00000530377 364 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC005000.1-201ENST00000536192 288 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC019322.1-201ENST00000571869 389 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AC245128.3-201ENST00000594721 748 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms