Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 BNIP3P19-201ENST00000605397 577 ntBASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 AL450270.1-201ENST00000606160 391 ntBASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 AP001437.1-201ENST00000608783 456 ntBASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 CR589904.2-201ENST00000612533 440 ntBASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 HSPD1P8-201ENST00000400121 1658 ntBASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 AC007159.1-201ENST00000566529 4706 ntBASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC33Q8N5R6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC011369.2-201ENST00000624423 1567 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 RN7SKP78-201ENST00000364711 318 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 LCN1P2-201ENST00000372030 223 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 RN7SKP108-201ENST00000411367 328 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 SETP9-201ENST00000423837 832 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC007000.2-201ENST00000442564 487 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 SUMO2P1-206ENST00000445436 284 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 VN1R38P-201ENST00000450265 887 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC105420.1-201ENST00000504389 582 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 IGLVIV-64-201ENST00000518581 301 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 COX6B1P4-201ENST00000519826 484 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AP005639.1-201ENST00000526939 192 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC027369.2-201ENST00000528030 440 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 OR4A6P-201ENST00000534364 970 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC233702.7-202ENST00000582941 211 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC241377.1-201ENST00000619797 406 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AC026124.2-201ENST00000621847 656 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 SNX18P12-201ENST00000624821 759 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 SAMM50P1-201ENST00000455403 1399 ntBASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC33Q8N5R6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 SNORD16-201ENST00000362803 99 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 RNA5SP478-201ENST00000364657 115 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 AC005522.1-201ENST00000395416 346 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 UBE2V1P14-201ENST00000415815 558 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 HSFY7P-201ENST00000432672 318 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 HSFY8P-201ENST00000437934 318 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 HSFY5P-201ENST00000453726 309 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 CABYRP1-201ENST00000465493 1045 ntBASIC6.52□□□□□ -1.37
CCDC33Q8N5R6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms