Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MTCO1P11-201ENST00000429111 1528 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AC011411.1-201ENST00000509592 876 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 ATP5LP3-201ENST00000514223 304 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AC137627.1-201ENST00000545761 289 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AC090022.1-201ENST00000546569 311 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AC008115.3-201ENST00000614874 549 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AC007204.2-201ENST00000615022 616 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AL691477.1-201ENST00000624398 162 ntBASIC8.84□□□□□ -0.99
VPS8Q8N3P4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
VPS8Q8N3P4 AL034546.1-201ENST00000623740 3693 ntBASIC8.83□□□□□ -1
VPS8Q8N3P4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.83□□□□□ -1
VPS8Q8N3P4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
VPS8Q8N3P4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.83□□□□□ -1
VPS8Q8N3P4 AC007161.1-204ENST00000423039 460 ntBASIC8.83□□□□□ -1
VPS8Q8N3P4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.83□□□□□ -1
VPS8Q8N3P4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.83□□□□□ -1
VPS8Q8N3P4 RN7SKP253-201ENST00000516424 309 ntBASIC8.83□□□□□ -1
VPS8Q8N3P4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.83□□□□□ -1
VPS8Q8N3P4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
VPS8Q8N3P4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 AC232271.1-201ENST00000602455 2715 ntBASIC8.83□□□□□ -1
VPS8Q8N3P4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 AC025470.1-201ENST00000510053 2032 ntBASIC8.83□□□□□ -1
VPS8Q8N3P4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
VPS8Q8N3P4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.83□□□□□ -1
VPS8Q8N3P4 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS8Q8N3P4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
VPS8Q8N3P4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.83□□□□□ -1
VPS8Q8N3P4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS8Q8N3P4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.82□□□□□ -1
VPS8Q8N3P4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
VPS8Q8N3P4 AL121886.1-201ENST00000358609 435 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.82□□□□□ -1
VPS8Q8N3P4 RN7SKP229-201ENST00000410465 302 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.82□□□□□ -1
VPS8Q8N3P4 BX510359.3-201ENST00000422168 306 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC8.82□□□□□ -1
VPS8Q8N3P4 NANOGP9-201ENST00000439890 892 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 H3F3BP1-201ENST00000440551 403 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.82□□□□□ -1
VPS8Q8N3P4 AL450996.1-201ENST00000445574 1202 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 MEMO1P4-201ENST00000453590 386 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 AL035090.1-201ENST00000454835 332 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 LDHBP2-201ENST00000456969 1005 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.82□□□□□ -1
VPS8Q8N3P4 OR4A6P-201ENST00000534364 970 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.82□□□□□ -1
VPS8Q8N3P4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC8.82□□□□□ -1
VPS8Q8N3P4 MIR8080-201ENST00000622224 89 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
VPS8Q8N3P4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.82□□□□□ -1
VPS8Q8N3P4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.82□□□□□ -1
VPS8Q8N3P4 AC123769.1-201ENST00000530992 3192 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.82□□□□□ -1
VPS8Q8N3P4 CIR1P2-201ENST00000514821 1342 ntBASIC8.82□□□□□ -1
VPS8Q8N3P4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.82□□□□□ -1
VPS8Q8N3P4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS8Q8N3P4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.82□□□□□ -1
VPS8Q8N3P4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS8Q8N3P4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS8Q8N3P4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.81□□□□□ -1
VPS8Q8N3P4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.81□□□□□ -1
VPS8Q8N3P4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
VPS8Q8N3P4 RN7SKP28-201ENST00000364770 305 ntBASIC8.81□□□□□ -1
VPS8Q8N3P4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.81□□□□□ -1
VPS8Q8N3P4 AC100832.1-201ENST00000471945 383 ntBASIC8.81□□□□□ -1
VPS8Q8N3P4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.81□□□□□ -1
VPS8Q8N3P4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.81□□□□□ -1
VPS8Q8N3P4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.81□□□□□ -1
VPS8Q8N3P4 AC079395.2-201ENST00000610982 737 ntBASIC8.81□□□□□ -1
VPS8Q8N3P4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.81□□□□□ -1
VPS8Q8N3P4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
VPS8Q8N3P4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.81□□□□□ -1
VPS8Q8N3P4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
VPS8Q8N3P4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.81□□□□□ -1
VPS8Q8N3P4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.81□□□□□ -1
VPS8Q8N3P4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VPS8Q8N3P4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.81□□□□□ -1
VPS8Q8N3P4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
VPS8Q8N3P4 LCOR-201ENST00000286067 4542 ntBASIC8.81□□□□□ -1
VPS8Q8N3P4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms