Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 MFSD8-219ENST00000641228 2559 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AK4P4-201ENST00000419465 646 ntBASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 OSTCP1-201ENST00000455507 450 ntBASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 MIR4310-201ENST00000582950 57 ntBASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 AC093388.1-201ENST00000609166 430 ntBASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 MAPK10-350ENST00000641777 965 ntBASIC5.4□□□□□ -1.54
C9orf40Q8IXQ3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.4□□□□□ -1.55
C9orf40Q8IXQ3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC007998.4-201ENST00000612496 2533 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AL355834.1-201ENST00000556602 3965 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 RNA5SP510-201ENST00000364697 99 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AL357752.1-201ENST00000412817 349 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC127526.2-201ENST00000426436 775 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 RPL12P11-201ENST00000439970 501 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 SNRPCP3-201ENST00000474888 476 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 NENFP3-201ENST00000503735 313 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 PSMA2P2-201ENST00000504319 686 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 SNORD46.2-201ENST00000516021 102 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 SNORA70.20-201ENST00000516848 126 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC022826.1-201ENST00000519383 805 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC079600.1-201ENST00000550326 297 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC015802.2-201ENST00000589690 189 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AL049840.6-201ENST00000604583 345 ntBASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms