Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 RPL35-202ENST00000373570 493 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 MIR16-1-201ENST00000385271 89 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 RNU6-1106P-201ENST00000390845 107 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 CISD1P1-201ENST00000393907 327 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 RPL4P5-201ENST00000413888 1276 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 FAM213AP1-201ENST00000418757 668 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 IFNA20P-201ENST00000436840 528 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC097527.1-201ENST00000437031 530 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 SKP1P1-201ENST00000438081 489 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 RN7SL761P-201ENST00000463259 278 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC083798.1-201ENST00000472671 131 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC093270.1-201ENST00000482584 486 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC108688.1-201ENST00000485817 713 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 RPS3AP50-201ENST00000487064 803 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC023194.1-201ENST00000493084 308 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 OR7E99P-201ENST00000505750 922 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AP001189.2-201ENST00000527320 189 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 OR11J5P-201ENST00000556889 934 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 VN1R67P-201ENST00000568379 913 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 RN7SL198P-201ENST00000583190 258 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 HMGN1P30-201ENST00000589286 268 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC011497.2-201ENST00000600255 639 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC007450.2-201ENST00000614160 290 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AL139351.1-201ENST00000622092 320 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AP006248.2-201ENST00000623309 592 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 AP000590.1-201ENST00000624943 464 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 ATM-228ENST00000639240 498 ntTSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 ABBA01040607.1-201ENST00000640749 321 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 CDR1-202ENST00000625883 1485 ntBASIC8.36□□□□□ -1.07
PACS2Q86VP3 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PACS2Q86VP3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PACS2Q86VP3 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PACS2Q86VP3 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PACS2Q86VP3 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PACS2Q86VP3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PACS2Q86VP3 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
PACS2Q86VP3 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PACS2Q86VP3 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.35□□□□□ -1.07
PACS2Q86VP3 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PACS2Q86VP3 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PACS2Q86VP3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
PACS2Q86VP3 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PACS2Q86VP3 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.35□□□□□ -1.07
PACS2Q86VP3 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms