Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU1-87P-201ENST00000363727 170 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 FAT1P1-201ENST00000406588 507 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC023141.1-201ENST00000419418 379 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AL390840.1-201ENST00000420303 988 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 GLRXP1-201ENST00000423261 334 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AL022721.1-201ENST00000436521 505 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC016908.1-201ENST00000442571 1219 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC239798.1-201ENST00000449024 1176 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AL354872.1-201ENST00000456361 967 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AL672167.3-201ENST00000465951 960 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 PA2G4P4-201ENST00000473864 1182 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 MTND6P6-201ENST00000478031 263 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RN7SL282P-201ENST00000479676 297 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC079841.1-201ENST00000481228 950 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RN7SL338P-201ENST00000481467 293 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 TRBV8-1-201ENST00000481590 279 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RN7SL864P-201ENST00000493457 285 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC114300.1-201ENST00000502347 280 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC113347.3-201ENST00000509113 148 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 NTAN1P2-201ENST00000515730 940 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RNU6-678P-201ENST00000516832 109 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC113191.1-201ENST00000517759 403 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC023632.1-201ENST00000518463 375 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 OR5AK1P-201ENST00000524837 922 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 SLC25A51P2-201ENST00000535708 889 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC091489.2-201ENST00000566263 604 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC068276.1-201ENST00000605793 379 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC243772.3-202ENST00000609662 1148 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC131902.3-201ENST00000611767 581 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC010338.1-201ENST00000621823 717 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC241585.4-201ENST00000640951 686 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.77□□□□□ -1.16
FOXR1Q6PIV2 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.77□□□□□ -1.16
FOXR1Q6PIV2 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.16
FOXR1Q6PIV2 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 AC100810.3-201ENST00000633189 2240 ntBASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
FOXR1Q6PIV2 RNU6-500P-201ENST00000362349 107 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms