Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.8□□□□□ -1.32
GABPAQ06546 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.8□□□□□ -1.32
GABPAQ06546 AL596275.2-208ENST00000641192 594 ntBASIC6.8□□□□□ -1.32
GABPAQ06546 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.8□□□□□ -1.32
GABPAQ06546 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
GABPAQ06546 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.8□□□□□ -1.32
GABPAQ06546 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.8□□□□□ -1.32
GABPAQ06546 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
GABPAQ06546 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.79□□□□□ -1.32
GABPAQ06546 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.79□□□□□ -1.32
GABPAQ06546 IMMTP1-201ENST00000435590 2219 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 RN7SKP124-201ENST00000364730 341 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 RNA5SP30-201ENST00000365552 115 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.79□□□□□ -1.32
GABPAQ06546 OR2AT2P-201ENST00000413438 905 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 NIFKP3-201ENST00000417799 865 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 AC113412.1-201ENST00000425840 504 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 AC006539.1-201ENST00000481419 501 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 AC074255.1-201ENST00000511259 501 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.79□□□□□ -1.32
GABPAQ06546 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.79□□□□□ -1.32
GABPAQ06546 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 AC006115.2-201ENST00000596823 202 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 AC007683.2-201ENST00000624681 714 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 MFSD8-239ENST00000641590 2479 ntBASIC6.79□□□□□ -1.32
GABPAQ06546 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
GABPAQ06546 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.79□□□□□ -1.32
GABPAQ06546 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
GABPAQ06546 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
GABPAQ06546 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
GABPAQ06546 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.79□□□□□ -1.32
GABPAQ06546 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 AC117409.1-201ENST00000470499 1310 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
GABPAQ06546 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
GABPAQ06546 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.78□□□□□ -1.32
GABPAQ06546 RNA5SP251-201ENST00000410614 137 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.78□□□□□ -1.32
GABPAQ06546 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.78□□□□□ -1.32
GABPAQ06546 AC012075.1-201ENST00000436549 580 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 CYCSP51-201ENST00000443545 318 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.78□□□□□ -1.32
GABPAQ06546 DUTP7-201ENST00000507982 486 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 NRBF2P4-201ENST00000520874 850 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 IGKV2-18-201ENST00000522607 343 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.78□□□□□ -1.32
GABPAQ06546 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.78□□□□□ -1.32
GABPAQ06546 AL049872.1-201ENST00000556323 322 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.78□□□□□ -1.32
GABPAQ06546 AC007225.2-201ENST00000562529 256 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.78□□□□□ -1.32
GABPAQ06546 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.78□□□□□ -1.32
GABPAQ06546 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.78□□□□□ -1.32
GABPAQ06546 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.78□□□□□ -1.32
GABPAQ06546 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 AC008115.3-201ENST00000614874 549 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 AL161756.3-201ENST00000641216 2071 ntBASIC6.78□□□□□ -1.32
GABPAQ06546 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
GABPAQ06546 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
GABPAQ06546 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.77□□□□□ -1.33
GABPAQ06546 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
GABPAQ06546 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
GABPAQ06546 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms