Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SSBP1Q04837 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP1Q04837 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP1Q04837 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.81□□□□□ -1.64
SSBP1Q04837 AC007996.1-201ENST00000620414 2821 ntBASIC4.81□□□□□ -1.64
SSBP1Q04837 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AL603750.1-201ENST00000624216 1717 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 TRIM51GP-201ENST00000534741 1350 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP1Q04837 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 RPL11P4-201ENST00000332269 436 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AC017079.1-201ENST00000333650 415 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 RNU1-134P-201ENST00000362935 165 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 RNA5SP85-201ENST00000365378 119 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SSBP1Q04837 PRELID1P1-201ENST00000403549 660 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AL033519.1-201ENST00000407266 307 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 PCNPP4-201ENST00000414817 517 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC117434.1-201ENST00000419971 836 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 TUBB4BP6-201ENST00000437576 479 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC009244.1-201ENST00000450566 258 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 PRPF38AP1-201ENST00000451976 933 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AZGP1P2-201ENST00000454506 345 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.8□□□□□ -1.64
SSBP1Q04837 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 OR5AM1P-201ENST00000532136 1032 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SSBP1Q04837 H3F3BP2-201ENST00000583907 357 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.8□□□□□ -1.64
SSBP1Q04837 AL589765.6-201ENST00000601909 549 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AC009237.13-201ENST00000603193 276 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP1Q04837 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 ENSA-215ENST00000638926 360 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP1Q04837 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
SSBP1Q04837 Z83820.1-201ENST00000456978 1499 ntBASIC4.8□□□□□ -1.64
SSBP1Q04837 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP1Q04837 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSBP1Q04837 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP1Q04837 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 AC005005.4-201ENST00000623789 16698 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSBP1Q04837 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SSBP1Q04837 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSBP1Q04837 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP1Q04837 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SSBP1Q04837 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 AL078621.3-201ENST00000623707 2042 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
SSBP1Q04837 AC092634.1-201ENST00000366505 199 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 OR1L6-202ENST00000373684 1044 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSBP1Q04837 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSBP1Q04837 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 MRPL32P1-201ENST00000406301 247 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 UBTFL2-201ENST00000411859 1191 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 RPL35AP3-201ENST00000414680 288 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP1Q04837 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP1Q04837 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP1Q04837 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms