Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.26□□□□□ -1.57
H3F3AP84243 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3AP84243 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3AP84243 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 PARP4P2-201ENST00000446672 3326 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 AC006600.2-201ENST00000624834 2506 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H3F3AP84243 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H3F3AP84243 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
H3F3AP84243 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 NPM1P38-201ENST00000403835 865 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 MIR1203-201ENST00000408812 85 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 AC009506.2-201ENST00000420635 840 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 SETP9-201ENST00000423837 832 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.25□□□□□ -1.57
H3F3AP84243 RPS3AP38-201ENST00000435889 763 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 AC096775.1-201ENST00000437724 448 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
H3F3AP84243 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3AP84243 AL157777.1-201ENST00000468100 304 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 GAPDHP71-201ENST00000511530 1003 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3AP84243 NANOGNBP2-201ENST00000544753 553 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.25□□□□□ -1.57
H3F3AP84243 GARSP1-201ENST00000570895 719 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 OOSP1P2-201ENST00000579644 351 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 FO681491.1-202ENST00000623392 737 ntBASIC5.25□□□□□ -1.57
H3F3AP84243 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3AP84243 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H3F3AP84243 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.25□□□□□ -1.57
H3F3AP84243 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
H3F3AP84243 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.25□□□□□ -1.57
H3F3AP84243 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
H3F3AP84243 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.25□□□□□ -1.57
H3F3AP84243 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
H3F3AP84243 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
H3F3AP84243 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.24□□□□□ -1.57
H3F3AP84243 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 AC005261.2-201ENST00000593427 4258 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
H3F3AP84243 RNA5SP500-201ENST00000364486 119 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 MIR621-201ENST00000384919 96 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
H3F3AP84243 RN7SKP240-201ENST00000410583 375 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 AL035660.1-201ENST00000422041 222 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 DNAJA1P5-201ENST00000440278 943 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.24□□□□□ -1.57
H3F3AP84243 RPS17P15-201ENST00000475609 349 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 AC099521.1-201ENST00000482557 334 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.24□□□□□ -1.57
H3F3AP84243 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.24□□□□□ -1.57
H3F3AP84243 AC078899.1-201ENST00000521432 1185 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.24□□□□□ -1.57
H3F3AP84243 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 GTF2IP11-201ENST00000526931 420 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 AC090424.1-201ENST00000535243 736 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 AL138895.2-201ENST00000603019 178 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 MIR1910-201ENST00000636955 80 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 MAPK10-350ENST00000641777 965 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 AL591135.1-201ENST00000401578 5914 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 PDZK1P1-202ENST00000425209 1350 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
H3F3AP84243 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 AC087516.1-201ENST00000561236 2428 ntBASIC5.24□□□□□ -1.57
H3F3AP84243 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
H3F3AP84243 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.24□□□□□ -1.57
H3F3AP84243 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms