Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL451136.1-201ENST00000435399 325 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.73□□□□□ -1.33
CCNA1P78396 AC007386.1-201ENST00000455212 582 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 OR2AO1P-201ENST00000476497 403 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AC002456.2-201ENST00000509356 380 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.73□□□□□ -1.33
CCNA1P78396 KCTD9P4-201ENST00000526766 1166 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AC027026.1-201ENST00000532323 742 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.73□□□□□ -1.33
CCNA1P78396 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.73□□□□□ -1.33
CCNA1P78396 GARSP1-201ENST00000570895 719 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 PRELID3BP3-201ENST00000584963 545 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 uc_338.26-201ENST00000612659 160 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCNA1P78396 AP003789.1-201ENST00000617737 605 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AC022919.1-201ENST00000624979 626 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCNA1P78396 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCNA1P78396 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCNA1P78396 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCNA1P78396 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.73□□□□□ -1.33
CCNA1P78396 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCNA1P78396 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.73□□□□□ -1.33
CCNA1P78396 AOX3P-204ENST00000491025 2107 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCNA1P78396 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.72□□□□□ -1.33
CCNA1P78396 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 AC005618.1-201ENST00000606901 3148 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.72□□□□□ -1.33
CCNA1P78396 ZNF658B-201ENST00000602828 3408 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 AC053481.2-202ENST00000582394 1500 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CCNA1P78396 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.72□□□□□ -1.33
CCNA1P78396 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCNA1P78396 AL591135.1-201ENST00000401578 5914 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 RNU1-19P-201ENST00000363306 165 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.72□□□□□ -1.33
CCNA1P78396 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.72□□□□□ -1.33
CCNA1P78396 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.72□□□□□ -1.33
CCNA1P78396 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.72□□□□□ -1.33
CCNA1P78396 SDC4P-201ENST00000453285 601 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 FRG2FP-204ENST00000453982 852 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 RN7SL610P-201ENST00000463845 291 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.72□□□□□ -1.33
CCNA1P78396 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CCNA1P78396 YES1P1-201ENST00000418510 1628 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCNA1P78396 USP9YP3-201ENST00000434481 1766 ntBASIC6.72□□□□□ -1.33
CCNA1P78396 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.71□□□□□ -1.33
CCNA1P78396 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCNA1P78396 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
CCNA1P78396 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.71□□□□□ -1.33
CCNA1P78396 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.71□□□□□ -1.33
CCNA1P78396 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.71□□□□□ -1.33
CCNA1P78396 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CCNA1P78396 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
CCNA1P78396 AP000866.6-201ENST00000638898 3579 ntBASIC6.71□□□□□ -1.33
CCNA1P78396 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCNA1P78396 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCNA1P78396 CDY5P-201ENST00000411487 1580 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 CDY9P-201ENST00000451397 1580 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCNA1P78396 THAP12P9-201ENST00000503971 2360 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.71□□□□□ -1.34
CCNA1P78396 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCNA1P78396 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCNA1P78396 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCNA1P78396 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.71□□□□□ -1.34
CCNA1P78396 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.71□□□□□ -1.34
CCNA1P78396 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.71□□□□□ -1.34
CCNA1P78396 AC113412.1-201ENST00000425840 504 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.71□□□□□ -1.34
CCNA1P78396 CFL1P1-202ENST00000432948 411 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 FMO7P-201ENST00000436045 768 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 AC023141.8-201ENST00000442554 208 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 AL450996.1-201ENST00000445574 1202 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCNA1P78396 AL606490.1-201ENST00000452266 765 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 RPL7L1P3-201ENST00000455249 689 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 RN7SL515P-201ENST00000463999 297 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 PFN1P6-201ENST00000476786 399 ntBASIC6.71□□□□□ -1.34
CCNA1P78396 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.71□□□□□ -1.34
CCNA1P78396 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.71□□□□□ -1.34
CCNA1P78396 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms