Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.63□□□□□ -1.35
YBX1P67809 AC068135.1-201ENST00000446164 246 ntBASIC6.63□□□□□ -1.35
YBX1P67809 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.63□□□□□ -1.35
YBX1P67809 YRDCP3-201ENST00000456507 480 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC093899.1-201ENST00000457984 376 ntBASIC6.63□□□□□ -1.35
YBX1P67809 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.63□□□□□ -1.35
YBX1P67809 RPS4XP6-201ENST00000477670 797 ntBASIC6.63□□□□□ -1.35
YBX1P67809 RN7SL655P-201ENST00000486087 298 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC112184.1-201ENST00000505179 312 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.63□□□□□ -1.35
YBX1P67809 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 AL512310.3-201ENST00000547023 1335 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 PCNPP1-201ENST00000552501 511 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AL591767.3-201ENST00000554632 525 ntBASIC6.63□□□□□ -1.35
YBX1P67809 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.63□□□□□ -1.35
YBX1P67809 PPIAP14-201ENST00000577627 496 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 AC087575.1-201ENST00000585087 229 ntBASIC6.63□□□□□ -1.35
YBX1P67809 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 AC073648.5-201ENST00000603502 305 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC111186.1-201ENST00000604684 130 ntBASIC6.63□□□□□ -1.35
YBX1P67809 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.63□□□□□ -1.35
YBX1P67809 AL135786.2-201ENST00000608422 615 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 AC024257.5-201ENST00000612739 531 ntBASIC6.63□□□□□ -1.35
YBX1P67809 MIR6070-201ENST00000613967 103 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.63□□□□□ -1.35
YBX1P67809 AL137918.1-201ENST00000624542 1922 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC005355.2-201ENST00000625064 484 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 CASC19-243ENST00000641588 1546 ntBASIC6.63□□□□□ -1.35
YBX1P67809 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
YBX1P67809 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
YBX1P67809 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.62□□□□□ -1.35
YBX1P67809 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 RACGAP1P-201ENST00000550663 1879 ntBASIC6.62□□□□□ -1.35
YBX1P67809 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.62□□□□□ -1.35
YBX1P67809 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 ZNF812P-201ENST00000457674 1694 ntBASIC6.62□□□□□ -1.35
YBX1P67809 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.62□□□□□ -1.35
YBX1P67809 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.62□□□□□ -1.35
YBX1P67809 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
YBX1P67809 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.62□□□□□ -1.35
YBX1P67809 RNU6-1215P-201ENST00000384441 102 ntBASIC6.62□□□□□ -1.35
YBX1P67809 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.62□□□□□ -1.35
YBX1P67809 ST13P16-201ENST00000401760 781 ntBASIC6.62□□□□□ -1.35
YBX1P67809 SNORA11.3-201ENST00000408471 128 ntBASIC6.62□□□□□ -1.35
YBX1P67809 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.62□□□□□ -1.35
YBX1P67809 RPSAP60-201ENST00000415403 880 ntBASIC6.62□□□□□ -1.35
YBX1P67809 MTND4P3-201ENST00000417829 541 ntBASIC6.62□□□□□ -1.35
YBX1P67809 AC006366.1-201ENST00000422002 759 ntBASIC6.62□□□□□ -1.35
YBX1P67809 DUTP4-201ENST00000424782 475 ntBASIC6.62□□□□□ -1.35
YBX1P67809 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.62□□□□□ -1.35
YBX1P67809 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.62□□□□□ -1.35
YBX1P67809 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.62□□□□□ -1.35
YBX1P67809 RPL23AP28-201ENST00000448062 470 ntBASIC6.62□□□□□ -1.35
YBX1P67809 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.62□□□□□ -1.35
YBX1P67809 AC009244.1-201ENST00000450566 258 ntBASIC6.62□□□□□ -1.35
YBX1P67809 OTX2P1-201ENST00000450956 354 ntBASIC6.62□□□□□ -1.35
YBX1P67809 MEF2AP1-201ENST00000454867 863 ntBASIC6.62□□□□□ -1.35
YBX1P67809 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
YBX1P67809 SYPL1P1-201ENST00000473622 768 ntBASIC6.62□□□□□ -1.35
YBX1P67809 AC004815.1-201ENST00000484185 331 ntBASIC6.62□□□□□ -1.35
YBX1P67809 RPS7P11-201ENST00000484240 586 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms