Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 OR11H2-202ENST00000641517 1085 ntBASIC4.88□□□□□ -1.63
LMO4P61968 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC4.88□□□□□ -1.63
LMO4P61968 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 AC027279.1-201ENST00000568885 4284 ntBASIC4.88□□□□□ -1.63
LMO4P61968 AC068733.2-201ENST00000605434 1418 ntBASIC4.88□□□□□ -1.63
LMO4P61968 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC4.88□□□□□ -1.63
LMO4P61968 THAP12P9-201ENST00000503971 2360 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
LMO4P61968 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 AC112243.1-201ENST00000623949 3851 ntBASIC4.87□□□□□ -1.63
LMO4P61968 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 OR52B5P-204ENST00000641744 3467 ntBASIC4.87□□□□□ -1.63
LMO4P61968 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LMO4P61968 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 RNA5SP46-201ENST00000362370 120 ntBASIC4.87□□□□□ -1.63
LMO4P61968 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 MIR143-201ENST00000385300 106 ntBASIC4.87□□□□□ -1.63
LMO4P61968 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.87□□□□□ -1.63
LMO4P61968 AL353626.3-201ENST00000413399 657 ntBASIC4.87□□□□□ -1.63
LMO4P61968 HMGA1P8-201ENST00000414130 321 ntBASIC4.87□□□□□ -1.63
LMO4P61968 MTATP6P11-201ENST00000428071 670 ntBASIC4.87□□□□□ -1.63
LMO4P61968 KATNBL1P2-201ENST00000433311 835 ntBASIC4.87□□□□□ -1.63
LMO4P61968 RSL24D1P8-201ENST00000434442 492 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 AP000926.3-201ENST00000497201 299 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.87□□□□□ -1.63
LMO4P61968 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.87□□□□□ -1.63
LMO4P61968 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.87□□□□□ -1.63
LMO4P61968 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 GARSP1-201ENST00000570895 719 ntBASIC4.87□□□□□ -1.63
LMO4P61968 MIR4301-201ENST00000577203 66 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.87□□□□□ -1.63
LMO4P61968 AL683813.2-201ENST00000605245 502 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AC005972.3-201ENST00000606304 481 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AC022467.1-201ENST00000614738 749 ntBASIC4.87□□□□□ -1.63
LMO4P61968 BNIP3P41-202ENST00000616656 861 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AC004836.1-201ENST00000623032 634 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AP002371.2-201ENST00000624450 503 ntBASIC4.87□□□□□ -1.63
LMO4P61968 AC022919.1-201ENST00000624979 626 ntBASIC4.87□□□□□ -1.63
LMO4P61968 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 AC087565.3-203ENST00000641018 837 ntBASIC4.87□□□□□ -1.63
LMO4P61968 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LMO4P61968 AC087269.2-201ENST00000641764 975 ntBASIC4.87□□□□□ -1.63
LMO4P61968 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 CIR1P2-201ENST00000514821 1342 ntBASIC4.87□□□□□ -1.63
LMO4P61968 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMO4P61968 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.87□□□□□ -1.63
LMO4P61968 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
LMO4P61968 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
LMO4P61968 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 AP000641.1-201ENST00000531988 1639 ntBASIC4.86□□□□□ -1.63
LMO4P61968 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 DMD-211ENST00000378707 7410 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms