Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 AC135983.3-201ENST00000528049 1226 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 AP003033.2-201ENST00000528901 805 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RPS3AP61247 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.84□□□□□ -1.47
RPS3AP61247 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.84□□□□□ -1.47
RPS3AP61247 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 AL589863.1-201ENST00000595383 631 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 AC011500.1-201ENST00000601963 469 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 AP004372.1-201ENST00000604842 844 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 SNORA74.4-201ENST00000607595 199 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 AC024255.1-201ENST00000614376 102 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 AL356490.1-201ENST00000623079 479 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 AC079298.2-201ENST00000623885 459 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.84□□□□□ -1.47
RPS3AP61247 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.84□□□□□ -1.47
RPS3AP61247 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.84□□□□□ -1.47
RPS3AP61247 AC006453.5-201ENST00000636451 619 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.84□□□□□ -1.47
RPS3AP61247 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.84□□□□□ -1.47
RPS3AP61247 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RPS3AP61247 AL121768.1-201ENST00000613917 2544 ntBASIC5.84□□□□□ -1.47
RPS3AP61247 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RPS3AP61247 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
RPS3AP61247 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RPS3AP61247 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RPS3AP61247 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RPS3AP61247 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
RPS3AP61247 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RPS3AP61247 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.83□□□□□ -1.48
RPS3AP61247 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RPS3AP61247 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPS3AP61247 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RPS3AP61247 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RPS3AP61247 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RPS3AP61247 RN7SKP250-201ENST00000363924 321 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 UBE2V1P15-201ENST00000407776 448 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 REREP1Y-201ENST00000422655 198 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 MTND2P11-201ENST00000423638 648 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 BX276092.6-201ENST00000430476 250 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 GTF3AP6-201ENST00000432585 986 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 REREP2Y-201ENST00000439103 200 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AL691517.1-201ENST00000440833 1235 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 BX276092.8-201ENST00000455722 250 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 RN7SL39P-201ENST00000462264 297 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC005165.2-201ENST00000466070 380 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 LARP7P4-201ENST00000481075 878 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.83□□□□□ -1.48
RPS3AP61247 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 RPL5P14-201ENST00000494197 878 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.83□□□□□ -1.48
RPS3AP61247 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.83□□□□□ -1.48
RPS3AP61247 AC015864.1-201ENST00000496512 544 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.83□□□□□ -1.48
RPS3AP61247 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 AP001000.1-201ENST00000526843 742 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 OR4A40P-201ENST00000533878 948 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.83□□□□□ -1.48
RPS3AP61247 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.83□□□□□ -1.48
RPS3AP61247 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 OR4H6P-202ENST00000603819 340 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC012368.3-201ENST00000604190 219 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC005021.1-201ENST00000608730 355 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 AL132640.3-201ENST00000630473 177 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.83□□□□□ -1.48
RPS3AP61247 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPS3AP61247 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RPS3AP61247 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPS3AP61247 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.83□□□□□ -1.48
RPS3AP61247 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPS3AP61247 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.83□□□□□ -1.48
RPS3AP61247 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.83□□□□□ -1.48
RPS3AP61247 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RPS3AP61247 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.82□□□□□ -1.48
RPS3AP61247 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPS3AP61247 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPS3AP61247 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.82□□□□□ -1.48
RPS3AP61247 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms