Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.07□□□□□ -1.12
CLTCL1P53675 AC010245.2-201ENST00000606908 1167 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 AL137246.2-201ENST00000613439 662 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CLTCL1P53675 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.06□□□□□ -1.12
CLTCL1P53675 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.06□□□□□ -1.12
CLTCL1P53675 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLTCL1P53675 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.06□□□□□ -1.12
CLTCL1P53675 AC007161.1-204ENST00000423039 460 ntBASIC8.06□□□□□ -1.12
CLTCL1P53675 USP24P1-201ENST00000433802 779 ntBASIC8.06□□□□□ -1.12
CLTCL1P53675 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.06□□□□□ -1.12
CLTCL1P53675 RN7SL30P-201ENST00000488416 306 ntBASIC8.06□□□□□ -1.12
CLTCL1P53675 AC231760.1-201ENST00000498002 260 ntBASIC8.06□□□□□ -1.12
CLTCL1P53675 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.06□□□□□ -1.12
CLTCL1P53675 AC078878.1-201ENST00000539832 958 ntBASIC8.06□□□□□ -1.12
CLTCL1P53675 HMGN2P6-201ENST00000551091 273 ntBASIC8.06□□□□□ -1.12
CLTCL1P53675 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.06□□□□□ -1.12
CLTCL1P53675 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
CLTCL1P53675 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
CLTCL1P53675 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.06□□□□□ -1.12
CLTCL1P53675 AC005725.1-201ENST00000577346 2607 ntBASIC8.06□□□□□ -1.12
CLTCL1P53675 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.05□□□□□ -1.12
CLTCL1P53675 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.05□□□□□ -1.12
CLTCL1P53675 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.05□□□□□ -1.12
CLTCL1P53675 RPL12P39-201ENST00000455456 496 ntBASIC8.05□□□□□ -1.12
CLTCL1P53675 OSTCP1-201ENST00000455507 450 ntBASIC8.05□□□□□ -1.12
CLTCL1P53675 RPS17P5-201ENST00000498293 408 ntBASIC8.05□□□□□ -1.12
CLTCL1P53675 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC8.05□□□□□ -1.12
CLTCL1P53675 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.05□□□□□ -1.12
CLTCL1P53675 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.05□□□□□ -1.12
CLTCL1P53675 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.05□□□□□ -1.12
CLTCL1P53675 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.05□□□□□ -1.12
CLTCL1P53675 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC8.05□□□□□ -1.12
CLTCL1P53675 AC092944.2-201ENST00000605443 889 ntBASIC8.05□□□□□ -1.12
CLTCL1P53675 AC109583.2-201ENST00000617367 129 ntBASIC8.05□□□□□ -1.12
CLTCL1P53675 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.05□□□□□ -1.12
CLTCL1P53675 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.05□□□□□ -1.12
CLTCL1P53675 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLTCL1P53675 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CLTCL1P53675 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLTCL1P53675 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.04□□□□□ -1.12
CLTCL1P53675 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CLTCL1P53675 AC005294.1-201ENST00000355509 281 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 RNA5SP514-201ENST00000363717 111 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 RN7SKP279-201ENST00000411383 298 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.04□□□□□ -1.12
CLTCL1P53675 AC006455.6-201ENST00000426192 893 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.04□□□□□ -1.12
CLTCL1P53675 GAPDHP58-201ENST00000438477 1006 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 CBX1P5-201ENST00000475330 559 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.04□□□□□ -1.12
CLTCL1P53675 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC8.04□□□□□ -1.12
CLTCL1P53675 AL163952.1-202ENST00000569625 600 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 DHFRP1-201ENST00000579682 559 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 AC090607.5-201ENST00000615692 224 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 AC090527.3-201ENST00000619041 548 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 AP004607.3-201ENST00000530354 3915 ntBASIC8.04□□□□□ -1.12
CLTCL1P53675 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.04□□□□□ -1.12
CLTCL1P53675 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLTCL1P53675 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.04□□□□□ -1.12
CLTCL1P53675 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CLTCL1P53675 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLTCL1P53675 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLTCL1P53675 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLTCL1P53675 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLTCL1P53675 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CLTCL1P53675 OR4K12P-201ENST00000406538 961 ntBASIC8.03□□□□□ -1.12
CLTCL1P53675 SLC35E1P1-201ENST00000419313 864 ntBASIC8.03□□□□□ -1.12
CLTCL1P53675 AC115223.1-201ENST00000466377 870 ntBASIC8.03□□□□□ -1.12
CLTCL1P53675 RN7SL51P-201ENST00000468230 285 ntBASIC8.03□□□□□ -1.12
CLTCL1P53675 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.03□□□□□ -1.12
CLTCL1P53675 RPS7P6-201ENST00000485777 579 ntBASIC8.03□□□□□ -1.12
CLTCL1P53675 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.03□□□□□ -1.12
CLTCL1P53675 SNORA26.10-201ENST00000516427 141 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms