Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC003045.1-201ENST00000398779 713 ntBASIC6.52□□□□□ -1.37
NEK3P51956 VN1R20P-201ENST00000425215 966 ntBASIC6.52□□□□□ -1.37
NEK3P51956 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.52□□□□□ -1.37
NEK3P51956 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 MRPS21P3-201ENST00000436696 262 ntBASIC6.52□□□□□ -1.37
NEK3P51956 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 AC118758.1-202ENST00000454719 225 ntBASIC6.52□□□□□ -1.37
NEK3P51956 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 OR7E22P-201ENST00000478335 1035 ntBASIC6.52□□□□□ -1.37
NEK3P51956 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 AC016550.1-201ENST00000505348 785 ntBASIC6.52□□□□□ -1.37
NEK3P51956 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.52□□□□□ -1.37
NEK3P51956 RNA5SP418-201ENST00000515951 117 ntBASIC6.52□□□□□ -1.37
NEK3P51956 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.52□□□□□ -1.37
NEK3P51956 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.52□□□□□ -1.37
NEK3P51956 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 AC113192.3-201ENST00000529152 742 ntBASIC6.52□□□□□ -1.37
NEK3P51956 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.52□□□□□ -1.37
NEK3P51956 AC006518.1-201ENST00000541449 943 ntBASIC6.52□□□□□ -1.37
NEK3P51956 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.52□□□□□ -1.37
NEK3P51956 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.52□□□□□ -1.37
NEK3P51956 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.52□□□□□ -1.37
NEK3P51956 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.52□□□□□ -1.37
NEK3P51956 LINC00556-201ENST00000569603 412 ntBASIC6.52□□□□□ -1.37
NEK3P51956 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.52□□□□□ -1.37
NEK3P51956 AC233702.7-202ENST00000582941 211 ntBASIC6.52□□□□□ -1.37
NEK3P51956 CBX3P2-202ENST00000583365 535 ntBASIC6.52□□□□□ -1.37
NEK3P51956 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.52□□□□□ -1.37
NEK3P51956 AL163051.2-201ENST00000618976 735 ntBASIC6.52□□□□□ -1.37
NEK3P51956 AL591926.1-201ENST00000620542 217 ntBASIC6.52□□□□□ -1.37
NEK3P51956 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
NEK3P51956 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.52□□□□□ -1.37
NEK3P51956 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.52□□□□□ -1.37
NEK3P51956 AC011455.2-201ENST00000599320 3336 ntBASIC6.51□□□□□ -1.37
NEK3P51956 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NEK3P51956 RPL11P4-201ENST00000332269 436 ntBASIC6.51□□□□□ -1.37
NEK3P51956 CHMP1B2P-201ENST00000399581 597 ntBASIC6.51□□□□□ -1.37
NEK3P51956 HMGB3P7-201ENST00000400214 611 ntBASIC6.51□□□□□ -1.37
NEK3P51956 SNORA11.5-201ENST00000408163 128 ntBASIC6.51□□□□□ -1.37
NEK3P51956 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 RPL21P50-201ENST00000417698 477 ntBASIC6.51□□□□□ -1.37
NEK3P51956 RPS17P17-201ENST00000419392 409 ntBASIC6.51□□□□□ -1.37
NEK3P51956 RPS6P14-201ENST00000425165 719 ntBASIC6.51□□□□□ -1.37
NEK3P51956 PTP4A1P3-201ENST00000433661 420 ntBASIC6.51□□□□□ -1.37
NEK3P51956 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.51□□□□□ -1.37
NEK3P51956 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 EIF2S2P5-201ENST00000457635 968 ntBASIC6.51□□□□□ -1.37
NEK3P51956 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.51□□□□□ -1.37
NEK3P51956 SYT14P1-201ENST00000481459 721 ntBASIC6.51□□□□□ -1.37
NEK3P51956 NPM1P29-201ENST00000483112 803 ntBASIC6.51□□□□□ -1.37
NEK3P51956 AC116562.1-201ENST00000485355 781 ntBASIC6.51□□□□□ -1.37
NEK3P51956 AC022415.1-202ENST00000486612 523 ntBASIC6.51□□□□□ -1.37
NEK3P51956 RN7SL362P-201ENST00000494228 267 ntBASIC6.51□□□□□ -1.37
NEK3P51956 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 RNA5SP473-201ENST00000516402 125 ntBASIC6.51□□□□□ -1.37
NEK3P51956 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.51□□□□□ -1.37
NEK3P51956 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.51□□□□□ -1.37
NEK3P51956 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 AC004923.2-201ENST00000529649 369 ntBASIC6.51□□□□□ -1.37
NEK3P51956 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.51□□□□□ -1.37
NEK3P51956 OR4A40P-201ENST00000533878 948 ntBASIC6.51□□□□□ -1.37
NEK3P51956 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.51□□□□□ -1.37
NEK3P51956 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.51□□□□□ -1.37
NEK3P51956 AC023158.1-201ENST00000561632 1025 ntBASIC6.51□□□□□ -1.37
NEK3P51956 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.51□□□□□ -1.37
NEK3P51956 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 DNAJC19P3-201ENST00000594491 331 ntBASIC6.51□□□□□ -1.37
NEK3P51956 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 AP001033.2-201ENST00000609701 1003 ntBASIC6.51□□□□□ -1.37
NEK3P51956 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms