Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC13P31276 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXC13P31276 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HOXC13P31276 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HOXC13P31276 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 RNU1-134P-201ENST00000362935 165 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC13P31276 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC13P31276 AC015977.1-201ENST00000418887 292 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 AC002553.3-201ENST00000453002 341 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 AC112187.1-201ENST00000455837 479 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC13P31276 CYP4F27P-201ENST00000514557 494 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 RN7SKP34-201ENST00000516142 244 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC13P31276 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC13P31276 AC090651.1-201ENST00000567865 634 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC13P31276 AC027334.1-201ENST00000603257 310 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 MIR6826-201ENST00000617808 98 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 AC020763.5-201ENST00000623298 430 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 AC099654.6-201ENST00000636487 512 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
HOXC13P31276 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC13P31276 AC022325.1-201ENST00000502748 2199 ntBASIC6.33□□□□□ -1.4
HOXC13P31276 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HOXC13P31276 AC119674.1-202ENST00000641333 1860 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC13P31276 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 MIR323A-201ENST00000362199 86 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HOXC13P31276 RN7SKP151-201ENST00000410230 316 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 RNA5SP178-201ENST00000410380 128 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 AL513325.1-201ENST00000417716 1034 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 RPS17P17-201ENST00000419392 409 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC13P31276 RPL7L1P3-201ENST00000455249 689 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC13P31276 AL035690.1-201ENST00000490892 383 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 AC021146.10-201ENST00000515628 706 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 RNA5SP362-201ENST00000516048 118 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC13P31276 AC021269.1-201ENST00000526860 705 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 AP001804.2-201ENST00000533932 910 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC13P31276 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC13P31276 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC13P31276 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 SNORA35B-201ENST00000607417 129 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 AC129778.1-202ENST00000623812 261 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC13P31276 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC13P31276 AL591379.1-207ENST00000635982 261 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 AL049767.1-202ENST00000637826 242 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HOXC13P31276 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HOXC13P31276 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC13P31276 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 AC009779.8-201ENST00000641684 4384 ntBASIC6.32□□□□□ -1.4
HOXC13P31276 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC13P31276 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXC13P31276 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXC13P31276 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXC13P31276 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXC13P31276 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXC13P31276 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXC13P31276 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms