Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.37□□□□□ -1.07
PTPRMP28827 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPRMP28827 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PTPRMP28827 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.36□□□□□ -1.07
PTPRMP28827 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PTPRMP28827 CHMP1B2P-201ENST00000399581 597 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 NPM1P40-201ENST00000412758 733 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPRMP28827 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPRMP28827 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPRMP28827 TRY2P-201ENST00000448860 689 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPRMP28827 AC112187.1-201ENST00000455837 479 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.36□□□□□ -1.07
PTPRMP28827 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 AC015864.1-201ENST00000496512 544 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPRMP28827 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPRMP28827 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC8.36□□□□□ -1.07
PTPRMP28827 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPRMP28827 BNIP3P33-201ENST00000598912 569 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 AL020997.2-201ENST00000602607 184 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 AC069307.1-201ENST00000602820 447 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 AC091193.1-201ENST00000604640 448 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 TCL6_3.1-201ENST00000619064 137 ntBASIC8.36□□□□□ -1.07
PTPRMP28827 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
PTPRMP28827 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPRMP28827 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPRMP28827 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.36□□□□□ -1.07
PTPRMP28827 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PTPRMP28827 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPRMP28827 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
PTPRMP28827 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
PTPRMP28827 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 AC005618.1-201ENST00000606901 3148 ntBASIC8.35□□□□□ -1.07
PTPRMP28827 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC8.35□□□□□ -1.07
PTPRMP28827 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.35□□□□□ -1.07
PTPRMP28827 RN7SL354P-201ENST00000469282 294 ntBASIC8.35□□□□□ -1.07
PTPRMP28827 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.35□□□□□ -1.07
PTPRMP28827 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.35□□□□□ -1.07
PTPRMP28827 RBM22P1-201ENST00000578589 1214 ntBASIC8.35□□□□□ -1.07
PTPRMP28827 AL161616.1-201ENST00000611867 286 ntBASIC8.35□□□□□ -1.07
PTPRMP28827 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PTPRMP28827 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
PTPRMP28827 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
PTPRMP28827 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPRMP28827 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PTPRMP28827 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PTPRMP28827 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTPRMP28827 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
PTPRMP28827 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPRMP28827 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
PTPRMP28827 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPRMP28827 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPRMP28827 DSTNP5-201ENST00000427921 523 ntBASIC8.34□□□□□ -1.07
PTPRMP28827 FAM96AP1-201ENST00000430879 482 ntBASIC8.34□□□□□ -1.07
PTPRMP28827 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 AL513533.1-201ENST00000453728 415 ntBASIC8.34□□□□□ -1.07
PTPRMP28827 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPRMP28827 AC005000.1-201ENST00000536192 288 ntBASIC8.34□□□□□ -1.07
PTPRMP28827 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.34□□□□□ -1.07
PTPRMP28827 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 AC009831.5-201ENST00000624000 3189 ntBASIC8.34□□□□□ -1.07
PTPRMP28827 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms