Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 AC103881.1-201ENST00000603476 538 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AC006270.3-201ENST00000605967 1036 ntBASIC8.05□□□□□ -1.12
RFX1P22670 U47924.1-201ENST00000606539 434 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AL135786.2-201ENST00000608422 615 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AC004948.1-201ENST00000609858 672 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AC100793.4-201ENST00000613683 429 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.05□□□□□ -1.12
RFX1P22670 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 AL121985.2-201ENST00000621192 555 ntBASIC8.05□□□□□ -1.12
RFX1P22670 PCMTD1P7-201ENST00000634506 357 ntBASIC8.05□□□□□ -1.12
RFX1P22670 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 AC116158.1-201ENST00000560231 2129 ntBASIC8.05□□□□□ -1.12
RFX1P22670 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.05□□□□□ -1.12
RFX1P22670 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RFX1P22670 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.04□□□□□ -1.12
RFX1P22670 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 RBPJP6-201ENST00000411556 1431 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RFX1P22670 OR10D1P-201ENST00000355343 936 ntBASIC8.04□□□□□ -1.12
RFX1P22670 RN7SKP63-201ENST00000363187 301 ntBASIC8.04□□□□□ -1.12
RFX1P22670 CNN3P1-201ENST00000401596 935 ntBASIC8.04□□□□□ -1.12
RFX1P22670 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 SNORA2C-201ENST00000408564 137 ntBASIC8.04□□□□□ -1.12
RFX1P22670 RN7SKP221-201ENST00000410420 301 ntBASIC8.04□□□□□ -1.12
RFX1P22670 RN7SKP131-201ENST00000410698 301 ntBASIC8.04□□□□□ -1.12
RFX1P22670 RPS15AP38-201ENST00000413110 372 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.04□□□□□ -1.12
RFX1P22670 PTP4A1P1-201ENST00000420539 515 ntBASIC8.04□□□□□ -1.12
RFX1P22670 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 DPRXP1-201ENST00000426312 460 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 E2F6P1-201ENST00000428850 745 ntBASIC8.04□□□□□ -1.12
RFX1P22670 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC8.04□□□□□ -1.12
RFX1P22670 AC244505.2-201ENST00000435089 759 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.04□□□□□ -1.12
RFX1P22670 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 AL928654.1-201ENST00000476081 354 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC109486.1-201ENST00000486833 374 ntBASIC8.04□□□□□ -1.12
RFX1P22670 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 AC111193.1-201ENST00000504097 155 ntBASIC8.04□□□□□ -1.12
RFX1P22670 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RFX1P22670 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC8.04□□□□□ -1.12
RFX1P22670 AC079140.3-201ENST00000511111 550 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC8.04□□□□□ -1.12
RFX1P22670 AC113191.1-201ENST00000517759 403 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC087808.1-201ENST00000520501 361 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 OR4C2P-201ENST00000530855 1064 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 AC090888.3-201ENST00000558917 509 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC8.04□□□□□ -1.12
RFX1P22670 AC007136.1-201ENST00000589141 199 ntBASIC8.04□□□□□ -1.12
RFX1P22670 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 SIGLEC31P-201ENST00000594237 551 ntBASIC8.04□□□□□ -1.12
RFX1P22670 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.04□□□□□ -1.12
RFX1P22670 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC8.04□□□□□ -1.12
RFX1P22670 AC008083.4-201ENST00000615076 444 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AL121873.1-201ENST00000616013 524 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AL136981.2-201ENST00000617319 734 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC015804.1-201ENST00000622935 435 ntBASIC8.04□□□□□ -1.12
RFX1P22670 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 AF001550.2-201ENST00000636643 217 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC233280.20-201ENST00000637412 416 ntBASIC8.04□□□□□ -1.12
RFX1P22670 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.04□□□□□ -1.12
RFX1P22670 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.04□□□□□ -1.12
RFX1P22670 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 CCT8P1-201ENST00000413611 1657 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AC007996.1-201ENST00000620414 2821 ntBASIC8.04□□□□□ -1.12
RFX1P22670 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 AP003471.1-202ENST00000319051 1988 ntBASIC8.04□□□□□ -1.12
RFX1P22670 AL121950.1-201ENST00000624993 2077 ntBASIC8.04□□□□□ -1.12
RFX1P22670 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RFX1P22670 SLC10A5P1-201ENST00000379063 1306 ntBASIC8.03□□□□□ -1.12
RFX1P22670 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms