Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.79□□□□□ -0.84
TOP2AP11388 RNU4-2-201ENST00000365668 141 ntBASIC9.79□□□□□ -0.84
TOP2AP11388 SNORA67-201ENST00000384423 137 ntBASIC9.79□□□□□ -0.84
TOP2AP11388 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC9.79□□□□□ -0.84
TOP2AP11388 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC9.79□□□□□ -0.84
TOP2AP11388 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC9.79□□□□□ -0.84
TOP2AP11388 AC013701.1-201ENST00000522657 465 ntBASIC9.79□□□□□ -0.84
TOP2AP11388 NANOGP3-201ENST00000605855 286 ntBASIC9.79□□□□□ -0.84
TOP2AP11388 CCL14-204ENST00000622526 472 ntTSL 3 BASIC9.79□□□□□ -0.84
TOP2AP11388 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
TOP2AP11388 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
TOP2AP11388 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC9.79□□□□□ -0.84
TOP2AP11388 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOP2AP11388 HSPA8P18-201ENST00000439846 1928 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
TOP2AP11388 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
TOP2AP11388 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 AL034546.1-201ENST00000623740 3693 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC9.78□□□□□ -0.84
TOP2AP11388 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
TOP2AP11388 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 RNA5SP305-201ENST00000362665 119 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 MIR551A-201ENST00000385042 96 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 PPP2R2DP1-201ENST00000420526 637 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.78□□□□□ -0.84
TOP2AP11388 HMGB1P40-201ENST00000525121 540 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 AL683813.2-201ENST00000605245 502 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 PACRG-210ENST00000611387 279 ntTSL 5 BASIC9.78□□□□□ -0.84
TOP2AP11388 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC9.78□□□□□ -0.84
TOP2AP11388 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.78□□□□□ -0.84
TOP2AP11388 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.78□□□□□ -0.84
TOP2AP11388 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 AC006206.1-201ENST00000544842 3387 ntBASIC9.78□□□□□ -0.84
TOP2AP11388 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.78□□□□□ -0.84
TOP2AP11388 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOP2AP11388 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
TOP2AP11388 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC9.77□□□□□ -0.84
TOP2AP11388 OR55B1P-203ENST00000641518 2602 ntBASIC9.77□□□□□ -0.84
TOP2AP11388 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
TOP2AP11388 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
TOP2AP11388 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
TOP2AP11388 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC9.77□□□□□ -0.84
TOP2AP11388 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
TOP2AP11388 RNA5SP326-201ENST00000363209 110 ntBASIC9.77□□□□□ -0.84
TOP2AP11388 RNA5SP87-201ENST00000384155 118 ntBASIC9.77□□□□□ -0.84
TOP2AP11388 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.77□□□□□ -0.84
TOP2AP11388 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC9.77□□□□□ -0.84
TOP2AP11388 AL672138.1-201ENST00000450604 1015 ntBASIC9.77□□□□□ -0.84
TOP2AP11388 AP001922.4-201ENST00000526967 290 ntBASIC9.77□□□□□ -0.84
TOP2AP11388 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC9.77□□□□□ -0.84
TOP2AP11388 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC9.77□□□□□ -0.84
TOP2AP11388 AGGF1P7-201ENST00000562369 913 ntBASIC9.77□□□□□ -0.84
TOP2AP11388 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC9.77□□□□□ -0.84
TOP2AP11388 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC9.77□□□□□ -0.84
TOP2AP11388 TEX41-254ENST00000626394 423 ntTSL 5 BASIC9.77□□□□□ -0.84
TOP2AP11388 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
TOP2AP11388 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.84
TOP2AP11388 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
TOP2AP11388 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
TOP2AP11388 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC9.77□□□□□ -0.85
TOP2AP11388 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
TOP2AP11388 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
TOP2AP11388 AC011493.1-201ENST00000596753 1632 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.77□□□□□ -0.85
TOP2AP11388 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 AC079753.1-201ENST00000623243 3868 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 OR4K12P-201ENST00000406538 961 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 RPL23AP18-201ENST00000416139 468 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC9.77□□□□□ -0.85
TOP2AP11388 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC9.77□□□□□ -0.85
TOP2AP11388 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC9.77□□□□□ -0.85
TOP2AP11388 AC083899.1-201ENST00000454465 3819 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 RPS7P6-201ENST00000485777 579 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 RN7SL97P-201ENST00000486780 299 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 SNRPCP2-201ENST00000504370 475 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 RN7SKP66-201ENST00000516681 231 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC9.77□□□□□ -0.85
TOP2AP11388 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms