Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CUX2O14529 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC9.92□□□□□ -0.82
CUX2O14529 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.92□□□□□ -0.82
CUX2O14529 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CUX2O14529 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CUX2O14529 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CUX2O14529 AC127070.3-201ENST00000503695 3263 ntBASIC9.92□□□□□ -0.82
CUX2O14529 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
CUX2O14529 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
CUX2O14529 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 RN7SKP28-201ENST00000364770 305 ntBASIC9.91□□□□□ -0.82
CUX2O14529 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 AC009237.10-201ENST00000414112 510 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AC009237.5-201ENST00000414271 501 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AC019050.1-201ENST00000418508 492 ntBASIC9.91□□□□□ -0.82
CUX2O14529 TEX41-205ENST00000431734 529 ntTSL 4 BASIC9.91□□□□□ -0.82
CUX2O14529 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.91□□□□□ -0.82
CUX2O14529 NUTF2P7-201ENST00000453086 375 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AC087672.1-201ENST00000479876 766 ntBASIC9.91□□□□□ -0.82
CUX2O14529 RN7SL447P-201ENST00000494711 245 ntBASIC9.91□□□□□ -0.82
CUX2O14529 SCARNA6.1-201ENST00000516989 238 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC9.91□□□□□ -0.82
CUX2O14529 MIR4260-201ENST00000583107 67 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
CUX2O14529 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 AL731556.1-201ENST00000394628 3711 ntBASIC9.91□□□□□ -0.82
CUX2O14529 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
CUX2O14529 RMRPP5-201ENST00000411156 267 ntBASIC9.91□□□□□ -0.82
CUX2O14529 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 RSL24D1P6-201ENST00000426934 401 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CUX2O14529 NDUFA12P1-201ENST00000455914 406 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AC002075.1-201ENST00000457396 676 ntBASIC9.91□□□□□ -0.82
CUX2O14529 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.91□□□□□ -0.82
CUX2O14529 AC073581.1-201ENST00000519036 575 ntBASIC9.91□□□□□ -0.82
CUX2O14529 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.91□□□□□ -0.82
CUX2O14529 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CUX2O14529 INTS6P1-201ENST00000504674 2530 ntBASIC9.9□□□□□ -0.82
CUX2O14529 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CUX2O14529 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.9□□□□□ -0.82
CUX2O14529 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CUX2O14529 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CUX2O14529 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.9□□□□□ -0.82
CUX2O14529 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CUX2O14529 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.9□□□□□ -0.82
CUX2O14529 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC9.9□□□□□ -0.82
CUX2O14529 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CUX2O14529 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CUX2O14529 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.9□□□□□ -0.82
CUX2O14529 AC112243.1-201ENST00000623949 3851 ntBASIC9.9□□□□□ -0.82
CUX2O14529 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
CUX2O14529 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CUX2O14529 RPS4XP5-201ENST00000419038 768 ntBASIC9.9□□□□□ -0.83
CUX2O14529 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.9□□□□□ -0.83
CUX2O14529 DNAJC19P7-201ENST00000428811 344 ntBASIC9.9□□□□□ -0.83
CUX2O14529 TDGF1P1-201ENST00000445734 527 ntBASIC9.9□□□□□ -0.83
CUX2O14529 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.9□□□□□ -0.83
CUX2O14529 OR7E158P-201ENST00000524483 910 ntBASIC9.9□□□□□ -0.83
CUX2O14529 MRPS21P7-201ENST00000566937 238 ntBASIC9.9□□□□□ -0.83
CUX2O14529 MYLK-221ENST00000583087 678 ntTSL 4 BASIC9.9□□□□□ -0.83
CUX2O14529 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.9□□□□□ -0.83
CUX2O14529 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CUX2O14529 AC003992.1-201ENST00000635364 557 ntBASIC9.9□□□□□ -0.83
CUX2O14529 FTO-223ENST00000640179 210 ntTSL 5 BASIC9.9□□□□□ -0.83
CUX2O14529 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
CUX2O14529 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC9.9□□□□□ -0.83
CUX2O14529 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
CUX2O14529 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 AL359091.1-201ENST00000449048 1734 ntBASIC9.89□□□□□ -0.83
CUX2O14529 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CUX2O14529 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 OR2W4P-201ENST00000406496 926 ntBASIC9.89□□□□□ -0.83
CUX2O14529 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.89□□□□□ -0.83
CUX2O14529 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC9.89□□□□□ -0.83
CUX2O14529 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.89□□□□□ -0.83
CUX2O14529 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC9.89□□□□□ -0.83
CUX2O14529 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
CUX2O14529 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
CUX2O14529 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC9.89□□□□□ -0.83
CUX2O14529 TXNP4-201ENST00000575018 310 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms