Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC188H7C350 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AC007938.2-201ENST00000604666 2634 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC188H7C350 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 AP004607.3-201ENST00000530354 3915 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC188H7C350 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 MTCO1P28-201ENST00000574177 1528 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC188H7C350 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
CCDC188H7C350 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC188H7C350 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC188H7C350 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 MTHFD2P5-201ENST00000320415 844 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC188H7C350 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 NPM1P37-201ENST00000403105 874 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 SNRPEP6-201ENST00000407465 277 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC188H7C350 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC188H7C350 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 OR52Y1P-201ENST00000452418 828 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 MTCYBP14-201ENST00000457471 715 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 AC022730.1-201ENST00000473114 568 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 AC016687.1-201ENST00000482574 353 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 RPSAP51-201ENST00000497462 645 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 RPS26P24-201ENST00000497656 331 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC188H7C350 SNX18P25-201ENST00000510539 758 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC188H7C350 AC139713.1-202ENST00000512366 460 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 Vault.2-201ENST00000516519 98 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC188H7C350 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CCDC188H7C350 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC188H7C350 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC188H7C350 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 SMIM12P1-201ENST00000603004 274 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 RPSAP75-201ENST00000605848 301 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC188H7C350 AL035661.1-201ENST00000620459 1144 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC188H7C350 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 AC012254.3-201ENST00000591183 2117 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC188H7C350 AC018628.1-201ENST00000624147 3819 ntBASIC6.05□□□□□ -1.44
CCDC188H7C350 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC188H7C350 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC188H7C350 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC117409.1-201ENST00000470499 1310 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC188H7C350 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC188H7C350 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 Y_RNA.62-201ENST00000362840 99 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RNU1-134P-201ENST00000362935 165 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC188H7C350 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC188H7C350 ZNF37CP-201ENST00000406795 241 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC188H7C350 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC023141.8-201ENST00000442554 208 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 WDR82P2-201ENST00000444540 928 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 LINC02210-201ENST00000444561 288 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 AL157385.1-201ENST00000446973 268 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC083899.1-201ENST00000454465 3819 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC063955.1-201ENST00000462872 685 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RN7SL393P-201ENST00000463588 296 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 RN7SL502P-201ENST00000481857 290 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RPL12P30-201ENST00000488389 499 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 HMGB3P14-201ENST00000494195 599 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RPS17P5-201ENST00000498293 408 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC147055.1-201ENST00000509261 750 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC188H7C350 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 RNA5SP96-201ENST00000516041 107 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC137627.1-201ENST00000545761 289 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms