Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU4-64P-201ENST00000410795 131 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 TMA16P2-201ENST00000413187 601 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 RPS27AP3-201ENST00000453803 454 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC073594.1-201ENST00000462065 364 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC016687.1-201ENST00000482574 353 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 RPS26P24-201ENST00000497656 331 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC092121.1-201ENST00000569452 202 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC012146.2-201ENST00000576545 416 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AP005119.1-201ENST00000580956 292 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AL353684.1-201ENST00000622677 1120 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 OR7A1P-202ENST00000641542 1158 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 KARSP1-201ENST00000451871 1752 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AC133552.1-201ENST00000569988 4007 ntBASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA3F8WFD2 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC110373.1-201ENST00000505994 3505 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AL031985.1-201ENST00000392713 418 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AL360271.1-201ENST00000395679 510 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AL096829.1-201ENST00000413677 457 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC017078.1-201ENST00000416146 368 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC244453.4-201ENST00000419150 388 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 RPL12P12-201ENST00000424633 501 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC104843.2-201ENST00000427666 297 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 TRIM60P16-201ENST00000444048 694 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 RPL31P15-201ENST00000449770 338 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC112187.1-201ENST00000455837 479 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 PSMA2P2-201ENST00000504319 686 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 SNORD46.2-201ENST00000516021 102 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 SNORA48.9-201ENST00000516419 162 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC022826.1-201ENST00000519383 805 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 NPM1P5-201ENST00000557228 838 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AL137067.2-201ENST00000621202 131 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 AL442128.2-201ENST00000620246 1824 ntBASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA3F8WFD2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms