Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 NLRP3P1-201ENST00000622303 1785 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 SNURFL-201ENST00000309296 343 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 RN7SKP149-201ENST00000363008 344 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 RNA5SP505-201ENST00000364748 108 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AK3P5-201ENST00000432033 519 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 PDCL3P4-201ENST00000489621 720 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 RN7SKP147-201ENST00000517154 244 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC011447.4-201ENST00000587562 111 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC009704.2-201ENST00000618739 483 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC068831.8-201ENST00000620171 435 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 MIR6758-201ENST00000620653 63 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC112243.1-201ENST00000623949 3851 ntBASIC7.17□□□□□ -1.26
RGPD3A6NKT7 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.17□□□□□ -1.26
RGPD3A6NKT7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 AL136981.1-203ENST00000451452 3844 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 FAM32BP-201ENST00000344033 333 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 RN7SKP95-201ENST00000362860 303 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 RN7SKP126-201ENST00000411143 300 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 COX6B1P1-201ENST00000415962 213 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 DDX39BP1-205ENST00000422507 192 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 AC096775.1-201ENST00000437724 448 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 HMGB1P40-201ENST00000525121 540 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 TCL6_3.1-201ENST00000619064 137 ntBASIC7.16□□□□□ -1.26
RGPD3A6NKT7 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RGPD3A6NKT7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 AL451136.1-201ENST00000435399 325 ntBASIC7.15□□□□□ -1.26
RGPD3A6NKT7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 AL161722.1-201ENST00000446972 1032 ntBASIC7.15□□□□□ -1.26
RGPD3A6NKT7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.15□□□□□ -1.26
RGPD3A6NKT7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 RN7SKP99-201ENST00000517028 307 ntBASIC7.15□□□□□ -1.26
RGPD3A6NKT7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 AL080317.3-201ENST00000607434 4315 ntBASIC7.15□□□□□ -1.26
RGPD3A6NKT7 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
RGPD3A6NKT7 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
RGPD3A6NKT7 AC019050.1-201ENST00000418508 492 ntBASIC7.15□□□□□ -1.27
RGPD3A6NKT7 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.15□□□□□ -1.27
RGPD3A6NKT7 AL672138.1-201ENST00000450604 1015 ntBASIC7.15□□□□□ -1.27
RGPD3A6NKT7 KCTD9P4-201ENST00000526766 1166 ntBASIC7.15□□□□□ -1.27
RGPD3A6NKT7 AC009117.1-201ENST00000563948 554 ntBASIC7.15□□□□□ -1.27
RGPD3A6NKT7 AP000919.1-201ENST00000582850 985 ntBASIC7.15□□□□□ -1.27
RGPD3A6NKT7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.15□□□□□ -1.27
RGPD3A6NKT7 AC027334.1-201ENST00000603257 310 ntBASIC7.15□□□□□ -1.27
RGPD3A6NKT7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RGPD3A6NKT7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms