Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC018717.1-201ENST00000457712 1505 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC093671.1-201ENST00000624981 2929 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 BX276092.6-201ENST00000430476 250 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 PSMD10P2-201ENST00000432890 672 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC010086.1-201ENST00000437359 1052 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AL512593.1-201ENST00000444758 779 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 SNORA74.1-201ENST00000516320 180 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC244502.2-201ENST00000543361 851 ntBASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF103-CHMP3A0A140T963 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 LINC01613-201ENST00000561476 2780 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC003985.2-201ENST00000562268 1669 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 OR13C3-201ENST00000374781 1108 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 RNU6-1263P-201ENST00000384601 106 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 ADAM24P-201ENST00000398655 2101 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 PSMA6P1-201ENST00000400275 741 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 RNA5SP156-201ENST00000410250 110 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 SNORA79B-201ENST00000410557 148 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 RN7SKP166-201ENST00000410812 305 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 RPS15AP30-201ENST00000420976 390 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 VTI1BP4-201ENST00000427516 527 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 CUBNP2-201ENST00000443534 1139 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC099670.1-201ENST00000455141 783 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 H3F3AP5-201ENST00000475267 429 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 RPL23AP40-201ENST00000487630 390 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC095052.1-201ENST00000509955 863 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC021269.1-201ENST00000526860 705 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC005224.3-201ENST00000584683 2140 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC011891.2-201ENST00000604949 397 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 MIR6774-201ENST00000614651 70 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC022325.1-201ENST00000502748 2199 ntBASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF103-CHMP3A0A140T963 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 511.8 ms