Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 TXNP4-201ENST00000575018 310 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AL352984.2-201ENST00000611153 546 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 RNA5SP375-201ENST00000362975 119 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 RN7SKP81-201ENST00000365603 331 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 U3.28-201ENST00000391249 210 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 RPS6P23-201ENST00000413224 722 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC126120.1-201ENST00000431082 470 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC064862.4-201ENST00000442180 334 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC093166.4-201ENST00000457867 318 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 NXT1P1-201ENST00000458481 316 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 RPSAP39-201ENST00000467439 883 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC008629.2-201ENST00000503783 483 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 HMGN2P36-201ENST00000529541 409 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC027088.4-201ENST00000611559 1947 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 MARK2P4-201ENST00000503381 2380 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 U3.25-201ENST00000391209 220 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 HMGB1P20-201ENST00000402555 677 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 DPPA2P3-201ENST00000411853 655 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AL162739.1-201ENST00000450606 307 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC88CQ9P219 OR11H2-202ENST00000641517 1085 ntBASIC5.57□□□□□ -1.52
CCDC88CQ9P219 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 RN7SKP124-201ENST00000364730 341 ntBASIC5.56□□□□□ -1.52
CCDC88CQ9P219 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC88CQ9P219 AL365220.1-201ENST00000432923 399 ntBASIC5.56□□□□□ -1.52
CCDC88CQ9P219 RN7SL269P-201ENST00000467795 305 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms