Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL352984.2-201ENST00000611153 546 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC073592.6-201ENST00000624271 415 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC007842.1-201ENST00000597336 2039 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 EPS15P1-202ENST00000459691 2071 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC093297.3-201ENST00000607056 2517 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 XKRY2-202ENST00000623874 1581 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 XKRY-202ENST00000624960 1581 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 HSPD1P7-201ENST00000447985 1686 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 RN7SKP185-201ENST00000362813 326 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 RN7SKP275-201ENST00000364626 301 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 AC004386.1-201ENST00000393214 761 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 RPS20P25-201ENST00000412447 352 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 NENFP1-201ENST00000419476 466 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 RN7SL570P-201ENST00000484405 292 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 AC074255.1-201ENST00000511259 501 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 IGLV3-24-201ENST00000517477 197 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 DPPA2P4-201ENST00000563717 878 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 AC009237.12-201ENST00000604755 742 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 AP001052.1-201ENST00000626421 99 ntBASIC6.15□□□□□ -1.42
SIX2Q9NPC8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SIX2Q9NPC8 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.15□□□□□ -1.43
SIX2Q9NPC8 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
SIX2Q9NPC8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SIX2Q9NPC8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.15□□□□□ -1.43
SIX2Q9NPC8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 RNA5SP453-201ENST00000362503 119 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 RNU11-201ENST00000387069 134 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC066692.1-201ENST00000421721 457 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC069154.1-201ENST00000432914 542 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 RPS23P2-201ENST00000463671 415 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC021678.3-201ENST00000517893 476 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 OR8Q1P-201ENST00000526467 655 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 BCAS2P1-201ENST00000528022 632 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AGGF1P7-201ENST00000562369 913 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AL360012.1-201ENST00000602813 131 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AL034374.2-201ENST00000605281 548 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC107308.1-201ENST00000615897 301 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 AC087821.1-201ENST00000623639 567 ntBASIC6.14□□□□□ -1.43
SIX2Q9NPC8 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.14□□□□□ -1.43
SIX2Q9NPC8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 GTF2IP4-201ENST00000453092 2054 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 455.3 ms