Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AL391987.1-201ENST00000441025 200 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 PPIAP20-201ENST00000449839 135 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 RPS23P6-201ENST00000466136 431 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 NENFP3-201ENST00000503735 313 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC109481.1-201ENST00000509173 282 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC021678.3-201ENST00000517893 476 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AL049779.3-201ENST00000557141 606 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AP001496.3-201ENST00000580230 913 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 RN7SL544P-201ENST00000617232 284 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 RN7SL763P-201ENST00000620922 284 ntBASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.72□□□□□ -1.33
VAT1LQ9HCJ6 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 AC239868.2-201ENST00000564237 4527 ntBASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
VAT1LQ9HCJ6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 SNORA17A-201ENST00000391185 133 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 OSTCP1-201ENST00000455507 450 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC009120.1-201ENST00000493458 473 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 SNORA43.3-201ENST00000517240 103 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC090424.1-201ENST00000535243 736 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC096996.1-201ENST00000563813 325 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 MIR4260-201ENST00000583107 67 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC009237.12-201ENST00000604755 742 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC018659.2-201ENST00000624690 715 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 SNORA17.5-201ENST00000630429 132 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 AC087565.3-203ENST00000641018 837 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VAT1LQ9HCJ6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 MRE11P1-201ENST00000464884 2127 ntBASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 AC005224.3-201ENST00000584683 2140 ntBASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 AL159987.1-201ENST00000347911 293 ntBASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 SNORA64.1-201ENST00000362600 132 ntBASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 RPS3AP38-201ENST00000435889 763 ntBASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.7□□□□□ -1.34
VAT1LQ9HCJ6 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms