Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NPM1P21-201ENST00000513394 762 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 HIF1AP1-201ENST00000553642 175 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 AC090312.2-201ENST00000582687 378 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 AP001554.1-201ENST00000604533 376 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 AL132796.3-201ENST00000624703 900 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 AC093909.6-201ENST00000624757 775 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 XIST-211ENST00000635841 1734 ntTSL 5 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.33□□□□□ -1.08
PHOX2BQ99453 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.33□□□□□ -1.08
PHOX2BQ99453 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHOX2BQ99453 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AP003972.1-201ENST00000625192 5446 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AP000542.3-201ENST00000623391 6114 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 NXPE1-201ENST00000251921 1888 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AL008638.6-201ENST00000623947 4254 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 RNY4P34-201ENST00000364779 95 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 SNORD81.2-201ENST00000365153 76 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHOX2BQ99453 SNORA51.7-201ENST00000384171 134 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC211486.3-201ENST00000412694 621 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 VDAC2P3-201ENST00000430995 828 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 TAAR7P-201ENST00000436141 242 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 SDCBPP1-201ENST00000440192 890 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC099563.1-201ENST00000456086 418 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 PSMC1P13-201ENST00000458195 985 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 TUBBP11-201ENST00000472255 252 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 RN7SL37P-201ENST00000490461 307 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 NIFKP7-201ENST00000503365 834 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 POU5F1P7-201ENST00000508759 541 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 MTND6P2-201ENST00000512226 524 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 BRD9P1-201ENST00000529855 560 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 TRAV15-201ENST00000556680 249 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC018558.5-201ENST00000565840 952 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AL163952.1-202ENST00000569625 600 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC141257.3-201ENST00000572906 215 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 OR7E19P-202ENST00000589942 844 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 OR1X1P-201ENST00000606159 931 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC090948.2-201ENST00000607363 564 ntBASIC8.32□□□□□ -1.08
PHOX2BQ99453 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.32□□□□□ -1.08
PHOX2BQ99453 AC103710.4-201ENST00000609301 899 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms