Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC073114.1-201ENST00000612027 490 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 MIR6883-201ENST00000614952 78 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC008626.2-201ENST00000624425 248 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC183089.2-201ENST00000637931 916 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AL596275.2-203ENST00000641951 371 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 OR2A3P-202ENST00000641249 1776 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PTCHD1Q96NR3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AL589993.1-201ENST00000407450 2524 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 CTAGE11P-201ENST00000451540 2353 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 OR11H13P-201ENST00000359695 979 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 RNU1-87P-201ENST00000363727 170 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 SNORD65C-201ENST00000390962 71 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 EEF1GP6-201ENST00000402309 905 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 RN7SKP148-201ENST00000410179 275 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC097721.1-201ENST00000427150 1253 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC007365.2-201ENST00000428806 458 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AL592437.1-201ENST00000443781 492 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC010878.1-201ENST00000456500 1047 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 RPL34P34-201ENST00000465389 354 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 RN7SL868P-201ENST00000485915 303 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 IGLC4-201ENST00000517690 248 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC020937.1-201ENST00000519677 1013 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC010198.2-201ENST00000550612 259 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 NBEAP1-201ENST00000554452 979 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AGGF1P4-201ENST00000568249 801 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC090826.1-203ENST00000569235 490 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 ZNF415P1-201ENST00000582279 1166 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 MIR4428-201ENST00000584884 73 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 RBM11P1-201ENST00000604951 799 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 TSHZ2-205ENST00000626626 670 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC011471.4-201ENST00000638271 216 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 OR7E91P-202ENST00000642062 1198 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 AC092104.1-201ENST00000497346 1441 ntBASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PTCHD1Q96NR3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms