Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC7Q96M83 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 MARK2P4-201ENST00000503381 2380 ntBASIC8.13□□□□□ -1.11
CCDC7Q96M83 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC7Q96M83 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC7Q96M83 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC7Q96M83 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 NEPNP-201ENST00000404786 1371 ntBASIC8.13□□□□□ -1.11
CCDC7Q96M83 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 OR2W4P-201ENST00000406496 926 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 LSM5-203ENST00000409782 649 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 RN7SKP29-201ENST00000410957 272 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 RN7SKP279-201ENST00000411383 298 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 CYCSP22-201ENST00000517555 339 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 AL589674.2-201ENST00000604304 337 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 AL139099.4-201ENST00000614802 114 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 KYNUP3-201ENST00000574386 1341 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC7Q96M83 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC7Q96M83 MAPK10-261ENST00000641050 3109 ntBASIC8.12□□□□□ -1.11
CCDC7Q96M83 AC078880.4-201ENST00000617627 1749 ntBASIC8.11□□□□□ -1.11
CCDC7Q96M83 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 PARP4P2-201ENST00000446672 3326 ntBASIC8.11□□□□□ -1.11
CCDC7Q96M83 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 RPL34P3-201ENST00000421454 338 ntBASIC8.11□□□□□ -1.11
CCDC7Q96M83 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 AL163193.1-201ENST00000444895 788 ntBASIC8.11□□□□□ -1.11
CCDC7Q96M83 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 PCNAP4-201ENST00000532690 730 ntBASIC8.11□□□□□ -1.11
CCDC7Q96M83 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 AC104695.2-201ENST00000605056 775 ntBASIC8.11□□□□□ -1.11
CCDC7Q96M83 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
CCDC7Q96M83 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC7Q96M83 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC7Q96M83 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC7Q96M83 OR9K1P-201ENST00000326513 941 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC7Q96M83 RN7SKP160-201ENST00000363804 340 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 RNA5SP91-201ENST00000390902 119 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 AL590399.2-201ENST00000427536 309 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 snoU13.29-201ENST00000459370 104 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 AC008410.1-201ENST00000483777 339 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 AC105384.2-201ENST00000508433 640 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 AP001496.3-201ENST00000580230 913 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 AC005229.3-201ENST00000603438 323 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 AL021707.7-201ENST00000607991 416 ntBASIC8.1□□□□□ -1.11
CCDC7Q96M83 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC7Q96M83 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC7Q96M83 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC7Q96M83 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC7Q96M83 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms