Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AL355834.1-201ENST00000556602 3965 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC016745.2-201ENST00000608834 3443 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC006484.1-201ENST00000435086 1884 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 U3.10-201ENST00000364459 214 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 Z82198.3-201ENST00000421145 199 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 RPSAP40-201ENST00000442343 891 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 RSU1P1-201ENST00000453416 441 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 FRG2FP-204ENST00000453982 852 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC108751.3-201ENST00000461814 1020 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC112484.3-201ENST00000505910 329 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC108103.1-201ENST00000511286 446 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC110056.1-201ENST00000525759 911 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 BTG1P1-201ENST00000540396 508 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 NPM1P5-201ENST00000557228 838 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AL109924.4-201ENST00000623089 670 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AL357140.4-201ENST00000636827 412 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AP004607.3-201ENST00000530354 3915 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLHC1Q8NHS4 AC008627.1-201ENST00000517511 1704 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 RN7SKP17-201ENST00000411242 351 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC099782.1-201ENST00000425889 474 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AL445928.1-201ENST00000435545 222 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 KF459542.1-201ENST00000450908 553 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 CEACAMP11-201ENST00000455211 583 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC004129.2-201ENST00000457229 287 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AL158068.1-201ENST00000506116 616 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC090826.1-203ENST00000569235 490 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC068768.2-201ENST00000602352 343 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC005828.7-201ENST00000607331 556 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AL133481.2-203ENST00000607558 139 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 MIR6813-201ENST00000621638 56 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC073488.3-201ENST00000631611 778 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 OR11H2-202ENST00000641517 1085 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 MFSD8-219ENST00000641228 2559 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 FBXL21-201ENST00000297158 1305 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms