Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC011411.1-201ENST00000509592 876 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC106872.4-201ENST00000510050 523 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 SNORD46.2-201ENST00000516021 102 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 RNA5SP438-201ENST00000516561 112 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC022826.1-201ENST00000519383 805 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC127024.6-201ENST00000621598 424 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC103703.1-201ENST00000634783 663 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAB43Q86YS6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAB43Q86YS6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAB43Q86YS6 KYNUP3-201ENST00000574386 1341 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 GNL2P1-201ENST00000451274 2190 ntBASIC5.72□□□□□ -1.49
RAB43Q86YS6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RAB43Q86YS6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB43Q86YS6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB43Q86YS6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB43Q86YS6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.71□□□□□ -1.49
RAB43Q86YS6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
RAB43Q86YS6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 AL355488.2-201ENST00000609909 2850 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB43Q86YS6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB43Q86YS6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB43Q86YS6 OR52B3P-201ENST00000314715 928 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 RNFT1P3-201ENST00000340898 1052 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB43Q86YS6 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 RN7SKP206-201ENST00000410823 293 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 EEF1B2P8-201ENST00000414101 671 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 AL035660.1-201ENST00000422041 222 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 AC079922.1-201ENST00000443291 359 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB43Q86YS6 ZNF619P1-201ENST00000446539 752 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AL445687.2-201ENST00000458156 728 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 RN7SL174P-201ENST00000475578 289 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAB43Q86YS6 OR56A7P-201ENST00000524865 941 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AP005119.1-201ENST00000580956 292 ntBASIC5.71□□□□□ -1.5
RAB43Q86YS6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
RAB43Q86YS6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAB43Q86YS6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAB43Q86YS6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAB43Q86YS6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAB43Q86YS6 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 MTND6P12-201ENST00000428247 522 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 OR13K1P-201ENST00000444577 975 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 AL445466.1-201ENST00000448432 357 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC090602.1-201ENST00000469695 252 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 AL122020.1-201ENST00000472287 459 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 RN7SL193P-201ENST00000491708 276 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC083795.1-201ENST00000491760 320 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC114781.3-201ENST00000512083 142 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 OR4H6P-201ENST00000563771 921 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC090651.1-201ENST00000567865 634 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 ZNF322P1-201ENST00000568013 1209 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 AP001357.1-201ENST00000586304 1053 ntBASIC5.7□□□□□ -1.5
RAB43Q86YS6 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.7□□□□□ -1.5
RAB43Q86YS6 AC024255.1-201ENST00000614376 102 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms